Ligand clusters for UniProt code P35475

Ligand clusters for P35475: Alpha-L-iduronidase from Homo sapiens

		Top 6 (of 15) ligand clusters Cluster 1. 11 ligand types 21 ligands Cluster 2. 3 ligand types 6 ligands Cluster 3. 3 ligand types 21 ligands Cluster 4. 2 ligand types 12 ligands Cluster 5. 3 ligand types 6 ligands Cluster 6. 2 ligand types 6 ligands
Representative protein: 3w81A

Structures

PDB		Schematic diagram
3w81A
6i6xA
3w82A
4obsA
4obrA
		more ...

Cluster 1 contains 11 ligand types

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Ligand		Description
		1. Ligand: GOL × 3 glycerin Glycerol PDB codes: 4kgj(A), 4obr(A), 6i6x(A).
		2. Ligand: NAG-NAG-BMA-MAN-MAN × 7 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB codes: 4kgj(A), 4kgl(A), 4kh2(A), 4mj2(A), 4mj4(A), 4obr(A), 6i6x(A).
		3. Ligand: IDR × 2 Alpha-L-Idopyranuronic acid PDB codes: 3w82(A), 4obr(A).
		4. Ligand: NAG-NAG-BMA-MAN-MAN-MAN-MAN-MAN-MAN-MAN × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB codes: 3w81(A), 3w82(A).
		5. Ligand: FIF × 1 2,6-Anhydro-5-Deoxy-5-Fluoro-L-Idonic acid PDB code: 4kh2(A).
		6. Ligand: H62 × 1 (1~{r},2~{r},3~{r},4~{s},6~{s})-6-Azanyl-2,3,4- Tris(oxidanyl)cyclohexane-1-Carboxylic acid PDB code: 6i6r(A).
		7. Ligand: H6B × 1 (1~{r},2~{r},3~{r},4~{s},5~{s},6~{r})-7-Methyl-3,4,5- Tris(oxidanyl)-7-Azabicyclo[4.1.0]heptane-2- Carboxylic acid PDB code: 6i6x(A).
		8. Ligand: IDF × 1 5-Fluoro-Alpha-L-Idopyranosyluronic acid fluoride PDB code: 4kgj(A).
		9. Ligand: IDJ × 1 (2r,3r,4r,5s)-3,4,5-Trihydroxypiperidine-2-Carboxylic acid PDB code: 4kgl(A).
		10. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 6i6r(A).
		11. Ligand: NAG-NAG-BMA-MAN-MAN-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 4obs(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4obs(A).
		2. Ligand: NAG-NAG-BMA-MAN-MAN-MAN-MAN-MAN-MAN × 4 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB codes: 4kgj(A), 4kgl(A), 4kh2(A), 4obr(A).
		3. Ligand: NAG-NAG-BMA-MAN-MAN-MAN-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 4mj2(A).

Cluster 3 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 10 glycerin Glycerol PDB codes: 3w81(A), 4kgj(A), 4kgl(A), 4kh2(A), 4mj2(A), 4mj4(A), 4obr(A), 4obs(A), 6i6r(A), 6i6x(A).
		2. Ligand: NAG × 3 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 4mj4(A), 4obs(A), 6i6r(A).
		3. Ligand: NAG-NAG × 8 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 3w81(A), 3w82(A), 4kgj(A), 4kgl(A), 4kh2(A), 4mj2(A), 4obr(A), 6i6x(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 11 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 3w81(A), 3w82(A), 4kgj(A), 4kgl(A), 4kh2(A), 4mj2(A), 4mj4(A), 4obr(A), 4obs(A), 6i6r(A), 6i6x(A).
		2. Ligand: TLA × 1 L(+)-Tartaric acid PDB code: 3w81(A).

Cluster 5 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 4kh2(A), 6i6x(A).
		2. Ligand: SO4 × 2 Sulfate ion PDB codes: 4obr(A), 4obs(A).
		3. Ligand: TLA × 2 L(+)-Tartaric acid PDB codes: 3w81(A), 6i6x(A).

Cluster 6 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 5 glycerin Glycerol PDB codes: 4mj4(A), 4obr(A), 4obs(A), 6i6r(A), 6i6x(A).
		2. Ligand: TLA × 1 L(+)-Tartaric acid PDB code: 3w81(A).