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EBI
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PDBsum
Ligand clusters for UniProt code P35049
Ligand clusters for P35049: Trypsin from Fusarium oxysporum
Top 6 (of 14) ligand clusters
Cluster 1.
7 ligand types
14 ligands
Cluster 2.
2 ligand types
5 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
5 ligands
Cluster 5.
1 ligand type
4 ligands
Cluster 6.
1 ligand type
4 ligands
Representative protein: 1fn8A
Structures
PDB
Schematic diagram
1fn8
A
1fy5
A
1gdu
A
1try
A
1gdn
A
more ...
Cluster 1 contains 7 ligand types
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Ligand
Description
1. Ligand:
LYS × 1
l-lysine
PDB code:
1pq8
(A).
2. Ligand:
ARG × 4
PDB codes:
1gdq
(A),
1pq5
(A),
1pq7
(A),
1pq8
(A).
3. Ligand:
GLY-ALA-ARG × 4
PDB codes:
1fn8
(A),
1fy4
(A),
1gdu
(A),
1xvm
(A).
4. Ligand:
GLY-ALA-LYS × 2
PDB codes:
1fy5
(A),
1gdn
(A).
5. Ligand:
GLY-GLY × 1
PDB code:
1pq8
(A).
6. Ligand:
ISP × 1
Phosphorylisopropane
PDB code:
1try
(A).
7. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1xvo
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
1fn8
(A),
1fy4
(A),
1fy5
(A),
1gdn
(A).
2. Ligand:
CIT × 1
citric acid
Citric acid
PDB code:
1pq8
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
IPA × 1
isopropyl alcohol
Isopropyl alcohol
PDB code:
1try
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
2g52
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 5
glycerin
Glycerol
PDB codes:
1fn8
(A),
1fy4
(A),
1fy5
(A),
1gdn
(A),
1gdq
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
1fn8
(A),
1fy4
(A),
1fy5
(A),
1gdn
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
1fn8
(A),
1fy4
(A),
1fy5
(A),
1gdn
(A).