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Ligand clusters for UniProt code P33371

Ligand clusters for P33371: tRNA-dihydrouridine(16) synthase from Escherichia coli (strain K12)

Top 6 (of 7) ligand clusters
Cluster 1.
1 ligand type
5 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4bf9A  
JSmol
 

Structures

PDB   Schematic diagram
4bf9A    
4bfaA    
4ycoA    
4ycpA    
3w9zA    

 

 Cluster 1 contains 1 ligand type

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Ligand Description


 
1. Ligand: FMN × 5
flavin mononucleotide
Flavin mononucleotide
PDB codes: 3w9z(A), 4bf9(A), 4bfa(A), 4yco(A), 4ycp(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: FMN × 1
flavin mononucleotide
Flavin mononucleotide
PDB code: 4bfa(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: NO3 × 1
Nitrate ion
PDB code: 4bfa(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 4ycp(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 4ycp(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4bfa(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4bfa(A).

 

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