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Ligand clusters for UniProt code P32324

Ligand clusters for P32324: Elongation factor 2 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

4 ligand clusters
Cluster 1.
3 ligand types
6 ligands
Cluster 2.
3 ligand types
8 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
3 ligands
Representative protein: 2e1rA  
JSmol
 

Structures

PDB   Schematic diagram
2e1rA    
1n0uA    
1u2rA    
2npfA    
2p8wT    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: SO1 × 4
[1r-(1.Alpha.,3a.Beta.,4.Beta.,4a.Beta.,7.Beta., 7a.Alpha.,8a.Beta.)]8a-[(6-Deoxy-4-O-Methyl-Beta-
D- Altropyranosyloxy)methyl]-4-Formyl-4,4a,5,6,7,7a,8,8a- Octahydro-7-Methyl-3-(1-Methylethyl)-
1,4-Methano-S- Indacene-3a(1h)-Carboxylic acid
PDB codes: 1n0u(A), 1u2r(A), 2p8y(T), 2p8z(T).


 
2. Ligand: MOU × 1
(1s,4r,5r,9s,11s)-2-({[(2s,5r,6r,7r,9s,10r)-2-(7- Carboxyheptyl)-6-Hydroxy-10-Methoxy-9-Methyl-3-
Oxo-1, 4,8-Trioxaspiro[4.5]dec-7-Yl]oxy}methyl)-9-Formyl-13- Isopropyl-5-
Methyltetracyclo[7.4.0.02,11.04.8]tridec- 12-Ene-1-Carboxylic acid
PDB code: 2npf(A).


 
3. Ligand: SOD × 1
(1s,4s,5s,6r,9s,11s)-6-Chloro-9-Formyl-13-Isopropyl-5- Methyl-2-({[(3ar,5r,7r ,7as)-7-Methyl-3-
Methylenehexahydro-2h-Furo[2,3-C]pyran-5- Yl]oxy}methyl)tetr acyclo[7.4.0.02,11.04,8]tridec-12-
Ene-1-Carboxylic aci
PDB code: 2e1r(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 1
PDB code: 1u2r(A).


 
2. Ligand: GDP × 4
Guanosine-5'-Diphosphate
PDB codes: 1u2r(A), 2e1r(A), 2npf(A), 2p8y(T).


 
3. Ligand: GNP × 3
Phosphoaminophosphonic acid-Guanylate ester
PDB codes: 2p8w(T), 2p8x(T), 2p8z(T).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: APR × 1
Adenosine-5-Diphosphoribose
PDB code: 1u2r(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: APR × 3
Adenosine-5-Diphosphoribose
PDB codes: 2p8x(T), 2p8y(T), 2p8z(T).

 

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