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Ligand clusters for UniProt code P29460
Ligand clusters for P29460: Interleukin-12 subunit beta from Homo sapiens
Top 6 (of 7) ligand clusters
Cluster 1.
6 ligand types
13 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5mzvA
Structures
PDB
Schematic diagram
5mzv
A
5mj4
A
5mj3
A
3hmx
A
3qwr
A
more ...
Cluster 1 contains 6 ligand types
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Ligand
Description
1. Ligand:
NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
3duh
(A),
6wdq
(A).
2. Ligand:
NAG-NAG-BMA-MAN-MAN × 5
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB codes:
3hmx
(A),
4grw
(B),
5mj3
(A),
5mj4
(A),
5njd
(A).
3. Ligand:
NAG-NAG-BMA-MAN × 2
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB codes:
3qwr
(A),
5mxa
(A).
4. Ligand:
NAG-NAG-MAN × 2
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB codes:
1f42
(A),
1f45
(A).
5. Ligand:
NAG-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code:
6uib
(B).
6. Ligand:
NAG-NAG-BMA-MAN-MAN-MAN-MAN × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB code:
5mzv
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG-NAG-BMA × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose.
PDB code:
6wdq
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
MNB × 1
5-Mercapto-2-Nitro-Benzoic acid
PDB code:
1f42
(A).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
3d87
(B).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
MNB × 1
5-Mercapto-2-Nitro-Benzoic acid
PDB code:
1f42
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
PG4 × 1
Tetraethylene glycol
PDB code:
5mj3
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
PGE × 1
Triethylene glycol
PDB code:
5mj3
(A).