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Ligand clusters for UniProt code P29460

Ligand clusters for P29460: Interleukin-12 subunit beta from Homo sapiens

Top 6 (of 7) ligand clusters
Cluster 1.
6 ligand types
13 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5mzvA  
JSmol
 

Structures

PDB   Schematic diagram
5mzvA    
5mj4A    
5mj3A    
3hmxA    
3qwrA    
 more ...

 

 Cluster 1 contains 6 ligand types

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Ligand Description


 
1. Ligand: NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 3duh(A), 6wdq(A).


 
2. Ligand: NAG-NAG-BMA-MAN-MAN × 5
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB codes: 3hmx(A), 4grw(B), 5mj3(A), 5mj4(A), 5njd(A).


 
3. Ligand: NAG-NAG-BMA-MAN × 2
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB codes: 3qwr(A), 5mxa(A).


 
4. Ligand: NAG-NAG-MAN × 2
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose.
PDB codes: 1f42(A), 1f45(A).


 
5. Ligand: NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 6uib(B).


 
6. Ligand: NAG-NAG-BMA-MAN-MAN-MAN-MAN × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 5mzv(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG-NAG-BMA × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose.
PDB code: 6wdq(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: MNB × 1
5-Mercapto-2-Nitro-Benzoic acid
PDB code: 1f42(A).


 
2. Ligand: PO4 × 1
Phosphate ion
PDB code: 3d87(B).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: MNB × 1
5-Mercapto-2-Nitro-Benzoic acid
PDB code: 1f42(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: PG4 × 1
Tetraethylene glycol
PDB code: 5mj3(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: PGE × 1
Triethylene glycol
PDB code: 5mj3(A).

 

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