Ligand clusters for UniProt code P29166

Ligand clusters for P29166: Iron hydrogenase 1 from Clostridium pasteurianum

		Top 6 (of 12) ligand clusters Cluster 1. 11 ligand types 48 ligands Cluster 2. 1 ligand type 24 ligands Cluster 3. 1 ligand type 24 ligands Cluster 4. 1 ligand type 24 ligands Cluster 5. 1 ligand type 8 ligands Cluster 6. 1 ligand type 4 ligands
Representative protein: 4xddA

Structures

PDB		Schematic diagram
4xddA
6n59A
1fehA
6nacA
3c8yA
		more ...

Cluster 1 contains 11 ligand types

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Ligand		Description
		1. Ligand: SF4 × 24 Iron/sulfur cluster PDB codes: 1c4a(A), 1c4c(A), 1feh(A), 3c8y(A), 4xdc(A), 4xdd(A), 5byq(A), 5byr(A), 5bys(A), 5la3(A), 5oef(A), 6gly(A), 6glz(A), 6gm0(A), 6gm1(A), 6gm2(A), 6gm3(A), 6gm4(A), 6gm8(A), 6h63(A), 6n59(A), 6n6p(A), 6nac(A), 6yf4(A).
		2. Ligand: 402 × 14 Dicarbonyl[bis(cyanide-Kappac)]-Mu- (Iminodimethanethiolatato-1kappas:2kappas)-Mu- (Oxomethylidene)diiron(2+) PDB codes: 4xdc(A), 5la3(A), 6gly(A), 6glz(A), 6gm0(A), 6gm1(A), 6gm2(A), 6gm3(A), 6gm4(A), 6gm8(A), 6n59(A), 6n6p(A), 6nac(A), 6yf4(A).
		3. Ligand: HC1 × 2 2 iron/2 sulfur/5 carbonyl/2 water inorganic cluster PDB codes: 1c4a(A), 1feh(A).
		4. Ligand: 4WV × 1 Bis(cyanido-Kappac)(dicarbonyl)-Mu-(Oxomethylidene)-Mu- (Oxydimethanethiolate- 1kappas:2kappas)diiron(2+) PDB code: 5byq(A).
		5. Ligand: 4WW × 1 Bis(cyanido-Kappac)(dicarbonyl)-Mu-(Oxomethylidene)[mu- Propane-1,3-Bis(thiolate)- 1kappa~2~s~1~, S~3~:2kappa~2~s~1~,S~3~]diiron(2+) PDB code: 5byr(A).
		6. Ligand: 4WX × 1 Bis(cyanido-Kappac)(dicarbonyl)-Mu-(Oxomethylidene)-Mu- (Sulfanediyldimethanethiolatato- 1kappas:2kappas) diiron(2+) PDB code: 5bys(A).
		7. Ligand: 9SQ × 1 Dicarbonyl[bis(cyanide-Kappac)]-Mu- (Iminodimethaneselenato- 1kappas:2kappas)-Mu- (Oxomethylidene)diiron(2+) PDB code: 5oef(A).
		8. Ligand: FU8 × 1 Dicarbonyl[bis(cyanide-Kappac)]-Mu-(Ethanethiolatato- 1kappas:2kappas)-Mu- (Ox omethylidene)diiron(2+) PDB code: 6h63(A).
		9. Ligand: HC0 × 1 2 iron/2 sulfur/6 carbonyl/1 water inorganic cluster PDB code: 1c4c(A).
		10. Ligand: HCN × 1 2 iron/2 sulfur/3 carbonyl/2 cyanide/water/methylether cluster PDB code: 3c8y(A).
_Cl		11. Metal: _CL × 1 PDB code: 4xdd(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: SF4 × 24 Iron/sulfur cluster PDB codes: 1c4a(A), 1c4c(A), 1feh(A), 3c8y(A), 4xdc(A), 4xdd(A), 5byq(A), 5byr(A), 5bys(A), 5la3(A), 5oef(A), 6gly(A), 6glz(A), 6gm0(A), 6gm1(A), 6gm2(A), 6gm3(A), 6gm4(A), 6gm8(A), 6h63(A), 6n59(A), 6n6p(A), 6nac(A), 6yf4(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: SF4 × 24 Iron/sulfur cluster PDB codes: 1c4a(A), 1c4c(A), 1feh(A), 3c8y(A), 4xdc(A), 4xdd(A), 5byq(A), 5byr(A), 5bys(A), 5la3(A), 5oef(A), 6gly(A), 6glz(A), 6gm0(A), 6gm1(A), 6gm2(A), 6gm3(A), 6gm4(A), 6gm8(A), 6h63(A), 6n59(A), 6n6p(A), 6nac(A), 6yf4(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: SF4 × 24 Iron/sulfur cluster PDB codes: 1c4a(A), 1c4c(A), 1feh(A), 3c8y(A), 4xdc(A), 4xdd(A), 5byq(A), 5byr(A), 5bys(A), 5la3(A), 5oef(A), 6gly(A), 6glz(A), 6gm0(A), 6gm1(A), 6gm2(A), 6gm3(A), 6gm4(A), 6gm8(A), 6h63(A), 6n59(A), 6n6p(A), 6nac(A), 6yf4(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 8 glycerin Glycerol PDB codes: 3c8y(A), 4xdd(A), 5byq(A), 5byr(A), 6n59(A), 6n6p(A), 6nac(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 4 glycerin Glycerol PDB codes: 3c8y(A), 6n59(A), 6n6p(A), 6nac(A).