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Ligand clusters for UniProt code P28366

Ligand clusters for P28366: Protein translocase subunit SecA from Bacillus subtilis (strain 168)

Top 6 (of 30) ligand clusters
Cluster 1.
5 ligand types
14 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1m6nA  
JSmol
 

Structures

PDB   Schematic diagram
1m6nA    
1m74A    
1tf2A    
2ibmA    
3iqmA    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 2
PDB codes: 1tf2(A), 3jv2(A).


 
2. Ligand: ADP × 5
Adenosine-5'-Diphosphate
PDB codes: 1m74(A), 1tf2(A), 2ibm(A), 3jv2(A), 6itc(A).


 
3. Ligand: SO4 × 5
Sulfate ion
PDB codes: 1m6n(A), 3iqm(A), 3iqy(A).


 
4. Ligand: BEF × 1
Beryllium trifluoride ion
PDB code: 6itc(A).


 
5. Ligand: BEF-ADP × 1
BEF=Beryllium trifluoride ion, ADP=Adenosine-5'-Diphosphate.
PDB code: 5eul(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 1m6n(A), 1m74(A), 3iqm(A).


 
2. Ligand: TBR × 1
Hexatantalum dodecabromide
PDB code: 5eul(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: TBR × 1
Hexatantalum dodecabromide
PDB code: 5eul(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: TBR × 1
Hexatantalum dodecabromide
PDB code: 5eul(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: TBR × 1
Hexatantalum dodecabromide
PDB code: 5eul(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: TBR × 1
Hexatantalum dodecabromide
PDB code: 5eul(A).

 

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