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EBI
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PDBsum
Ligand clusters for UniProt code P28223
Ligand clusters for P28223: 5-hydroxytryptamine receptor 2A from Homo sapiens
Top 6 (of 10) ligand clusters
Cluster 1.
8 ligand types
12 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6wh4A
Structures
PDB
Schematic diagram
6wh4
A
6a94
A
6a93
A
6wgt
A
6wgt
B
more ...
Cluster 1 contains 8 ligand types
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Ligand
Description
1. Ligand:
8NU × 1
risperidone
3-[2-[4-(6-Fluoranyl-1,2-Benzoxazol-3-Yl)piperidin-1- Yl]ethyl]-2-Methyl-6,7,8,9-
Tetrahydropyrido[1,2- A]pyrimidin-4-One
PDB code:
6a93
(A).
2. Ligand:
ZOT × 1
zotepine
2-(3-Chloranylbenzo[b][1]benzothiepin-5-Yl)oxy-N,N- Dimethyl-Ethanamine
PDB code:
6a94
(A).
3. Ligand:
PEG × 3
Di(hydroxyethyl)ether
PDB codes:
6wgt
(A),
6wh4
(A),
4. Ligand:
7LD × 2
(8alpha)-N,N-Diethyl-6-Methyl-9,10-Didehydroergoline-8- Carboxamide
PDB codes:
6wgt
(A),
5. Ligand:
89F × 2
1-Methyl-4-[(5~{s})-3-Methylsulfanyl-5,6- Dihydrobenzo[b][1]benzothiepin-5-Yl]piperazine
PDB codes:
6wh4
(A),
6. Ligand:
1PE × 1
Pentaethylene glycol
PDB code:
6a93
(A).
7. Ligand:
PO4 × 1
Phosphate ion
PDB code:
6wgt
(B).
8. Ligand:
U0G × 1
4-(2-{[(2-Hydroxyphenyl)methyl]amino}ethyl)-2,5- Dimethoxybenzonitrile
PDB code:
6wha
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
CLR × 1
cholesterol
Cholesterol
PDB code:
6wgt
(A).
2. Ligand:
OLA × 2
Oleic acid
PDB codes:
6wh4
(A),
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
CLR × 1
cholesterol
Cholesterol
PDB code:
6wh4
(A).
2. Ligand:
OLA × 3
Oleic acid
PDB codes:
6wgt
(A),
6wh4
(B).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
PLM × 1
palmitic acid
Palmitic acid
PDB code:
6a93
(A).
2. Ligand:
A6L × 1
2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB code:
6a94
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
CLR × 3
cholesterol
Cholesterol
PDB codes:
6a93
(A),
6a94
(A),
6wgt
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
OLA × 1
Oleic acid
PDB code:
6wgt
(A).