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Ligand clusters for UniProt code P24931

Ligand clusters for P24931: Rubrerythrin from Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)

3 ligand clusters
Cluster 1.
1 ligand type
1 ligand
Cluster 2.
3 ligand types
19 ligands
Cluster 3.
3 ligand types
9 ligands
Representative protein: 1b71A  
JSmol
 

Structures

PDB   Schematic diagram
1b71A    
1dvbA    
1lkoA    
1rytA    
1lkpA    
 more ...

 

 Cluster 1 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1qyb(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description

_Fe
 
1. Metal: _FE × 10
PDB codes: 1dvb(A), 1jyb(A), 1lkm(A), 1qyb(A), 1ryt(A), 1s2z(A), 1s30(A).

_Zn
 
2. Metal: _ZN × 5
PDB codes: 1b71(A), 1dvb(A), 1jyb(A), 1s2z(A), 1s30(A).

Fe2
 
3. Metal: FE2 × 4
PDB codes: 1lko(A), 1lkp(A),

 

 Cluster 3 contains 3 ligand types

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Ligand Description

_Fe
 
1. Metal: _FE × 6
PDB codes: 1dvb(A), 1jyb(A), 1lkm(A), 1ryt(A), 1s2z(A), 1s30(A).

_Zn
 
2. Metal: _ZN × 1
PDB code: 1qyb(A).

Fe2
 
3. Metal: FE2 × 2
PDB codes: 1lko(A), 1lkp(A).

 

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