Ligand clusters for UniProt code P24182

Ligand clusters for P24182: Biotin carboxylase from Escherichia coli (strain K12)

		Top 6 (of 9) ligand clusters Cluster 1. 29 ligand types 53 ligands Cluster 2. 3 ligand types 3 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 1dv2A

Structures

PDB		Schematic diagram
1dv2A
3jzfB
1k69A
2w6zA
6oi9A
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Cluster 1 contains 29 ligand types (of which only 20 are listed. Click for all)

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Ligand		Description
		1. Ligand: PO4 × 2 Phosphate ion PDB codes: 1bnc(A), 1dv1(A).
_Mg		2. Metal: _MG × 5 PDB codes: 2j9g(A), 3g8c(A), 3g8d(B), 3rv3(A), 3rv4(A).
		3. Ligand: BTN × 2 biotin Biotin PDB codes: 1k69(A), 3g8c(A).
		4. Ligand: GOL × 1 glycerin Glycerol PDB code: 3rv4(A).
		5. Ligand: ADP × 7 Adenosine-5'-Diphosphate PDB codes: 3g8c(A), 3g8d(B), 3rup(A), 3rv3(A), 3rv4(A).
_Cl		6. Metal: _CL × 7 PDB codes: 2v58(A), 2v5a(A), 2vr1(A), 2w6m(A), 2w6n(A), 2w6o(A), 2w70(A).
		7. Ligand: SO4 × 4 Sulfate ion PDB codes: 2j9g(A), 3g8d(A), 4hr7(A).
		8. Ligand: ATP × 2 Adenosine-5'-Triphosphate PDB codes: 1dv2(A), 1k69(A).
		9. Ligand: BCT × 2 Bicarbonate ion PDB codes: 3g8c(A), 3rv4(A).
_Ca		10. Metal: _CA × 2 PDB codes: 3rup(A),
		11. Ligand: ANP × 1 Phosphoaminophosphonic acid-Adenylate ester PDB code: 2j9g(A).
		12. Ligand: ATF × 1 Phosphodifluoromethylphosphonic acid-Adenylate ester PDB code: 2vr1(A).
		13. Ligand: CO3 × 1 Carbonate ion PDB code: 3jzf(A).
		14. Ligand: EDO × 1 1,2-Ethanediol PDB code: 6oi9(A).
		15. Ligand: JZK × 1 2-[(2-Chlorobenzyl)amino]-1-(Cyclohexylmethyl)-1h- Benzimidazole-5-Carboxamide PDB code: 3jzf(B).
		16. Ligand: JZL × 1 7-Amino-2-[(2-Chlorobenzyl)amino]-1-{[(1s,2s)-2- Hydroxycycloheptyl]methyl}-1h-Benzimidazole-5- Carboxamide PDB code: 3jzi(A).
		17. Ligand: L21 × 1 3-(3-Methylbut-2-En-1-Yl)-3h-Purin-6-Amine PDB code: 2w6z(A).
		18. Ligand: L22 × 1 4-(2-Amino-1,3-Thiazol-4-Yl)pyrimidin-2-Amine PDB code: 2w70(A).
		19. Ligand: L23 × 1 4-[1-(2,6-Dichlorobenzyl)-2-Methyl-1h- Imidazol-4-Yl]pyrimidin-2-Amine PDB code: 2w71(A).
		20. Ligand: LZJ × 1 6-(2,6-Dibromophenyl)pyrido[2,3-D]pyrimidine- 2,7-Diamine PDB code: 2v58(A).
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Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 4hr7(A).
_Cl		2. Metal: _CL × 1 PDB code: 3rup(A).
_Na		3. Metal: _NA × 1 PDB code: 3rv4(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 4hr7(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 4hr7(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 4hr7(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 6oi9(A).