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Ligand clusters for UniProt code P23222

Ligand clusters for P23222: Sensor protein FixL OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=fixL PE=1 SV=1

Top 6 (of 12) ligand clusters
Cluster 1.
7 ligand types
19 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4gczA  
JSmol
 

Structures

PDB   Schematic diagram
4gczA    
1y28A    
1drmA    
1lswA    
1lt0A    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: FMN × 1
flavin mononucleotide
Flavin mononucleotide
PDB code: 4gcz(A).


 
2. Ligand: HEM × 10
Protoporphyrin IX containing fe
PDB codes: 1drm(A), 1lsw(A), 1xj3(A), 1xj6(A), 1y28(A), 2cmn(A), 2owh(A), 2vv6(A), 2vv7(A), 2vv8(A).


 
3. Ligand: HEM-CMO × 4
HEM=Protoporphyrin IX containing fe, CMO=Carbon monoxide.
PDB codes: 1lsv(A), 1xj2(A), 1xj4(A), 2owj(A).


 
4. Ligand: CYN-HEM × 1
CYN=Cyanide ion, HEM=Protoporphyrin IX containing fe.
PDB code: 1lt0(A).


 
5. Ligand: HEM-1MZ × 1
HEM=Protoporphyrin IX containing fe, 1MZ=1-Methylimidazole.
PDB code: 1lsx(A).


 
6. Ligand: IMD-HEM × 1
IMD=Imidazole, HEM=Protoporphyrin IX containing fe.
PDB code: 1dp9(A).


 
7. Ligand: OXY-HEM × 1
OXY=Oxygen molecule, HEM=Protoporphyrin IX containing fe.
PDB code: 1dp6(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: ADP × 1
Adenosine-5'-Diphosphate
PDB code: 4gcz(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 4gcz(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 4gcz(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 4gcz(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 4gcz(A).

 

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