Ligand clusters for UniProt code P22141

Ligand clusters for P22141: Proteasome subunit beta type-4 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

		5 ligand clusters Cluster 1. 6 ligand types 37 ligands Cluster 2. 2 ligand types 2 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 3 ligands
Representative protein: 3e47J

Structures

PDB		Schematic diagram
3e47J
4j70J
3tddJ
4eu2K
4qz1J
		more ...

Cluster 1 contains 6 ligand types

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Ligand		Description
		1. Ligand: MES × 32 2-(N-Morpholino)-Ethanesulfonic acid PDB codes: 4qw6(J), 4qw7(J), 4qwf(J), 4qwi(J), 4qws(J), 4qwx(J), 4qxj(J), 4qz0(J), 4qz1(J), 4qz2(J), 4qz4(J), 4qz7(J), 4qzx(J), 5cgi(J), 5d0z(J), 5l52(J), 5l55(J), 5l5x(J), 5l5y(J), 5l60(J), 5l61(J), 5l62(J), 5l63(J), 5l64(J), 6htc(J), 6hv4(J), 6hw8(J), 6hw9(J), 6hwa(J), 6hwb(J), 6hwe(J), 6hwf(J).
		2. Ligand: 1KR × 1 Benzyl [(2s)-1-({(2r)-1-[(1s,2s)-2-{[(2r,3s,4s)-3- Formyl-2-Hydroxy-4- Methylhexanoyl]amino}cyclopropyl]- 4-Phenylbutan-2-Yl}amino)-1-Oxopropan-2-Yl]carbamate PDB code: 4j70(J).
		3. Ligand: BFO × 1 Benzyl n-[(Naphthalen-2-Ylmethoxy)carbonyl]-L-Alanyl- N~5~-[(2r,3s,4s)-3-Formyl-2-Hydroxy-4- Methylhexanoyl]- L-Ornithinate PDB code: 3tdd(J).
		4. Ligand: ESY × 1 Benzyl n-[(Benzyloxy)carbonyl]-L-Alanyl-N~6~-[(2r,3s, 4s)-3-Formyl-2-Hydroxy-4-Methylhexanoyl]-L- Lysinate PDB code: 3e47(J).
		5. Ligand: MPD × 1 (4s)-2-Methyl-2,4-Pentanediol PDB code: 4x6z(K).
		6. Ligand: WPI × 1 1,4-Bis[(4e)-5-(3,4,5-Trimethoxyphenyl)pent-4-En-1-Yl]- 1,4-Diazepane PDB code: 4eu2(K).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: 1KR × 1 Benzyl [(2s)-1-({(2r)-1-[(1s,2s)-2-{[(2r,3s,4s)-3- Formyl-2-Hydroxy-4- Methylhexanoyl]amino}cyclopropyl]- 4-Phenylbutan-2-Yl}amino)-1-Oxopropan-2-Yl]carbamate PDB code: 4j70(J).
		2. Ligand: ESY × 1 Benzyl n-[(Benzyloxy)carbonyl]-L-Alanyl-N~6~-[(2r,3s, 4s)-3-Formyl-2-Hydroxy-4-Methylhexanoyl]-L- Lysinate PDB code: 3e47(J).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4x6z(K).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4x6z(K).

Cluster 5 contains 1 ligand type

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Ligand		Description
_Mg		1. Metal: _MG × 3 PDB codes: 4qvy(J), 4qw0(J), 6gop(J).