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EBI
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PDBsum
Ligand clusters for UniProt code P21730
Ligand clusters for P21730: C5a anaphylatoxin chemotactic receptor 1 from Homo sapiens
Top 6 (of 7) ligand clusters
Cluster 1.
4 ligand types
5 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6c1qB
Structures
PDB
Schematic diagram
6c1q
B
6c1r
B
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
OLA × 2
Oleic acid
PDB codes:
6c1r
(B),
2. Ligand:
9P2 × 1
1-(1,3-Benzodioxol-5-Yl)-~{N}-(1,3-Benzodioxol-5- Ylmethyl)-~{N}-[(3-Butyl-2,5-Diphenyl-Imidazol-4-
Yl) methyl]methanamine
PDB code:
6c1q
(B).
3. Ligand:
EFD × 1
Avacopan
PDB code:
6c1r
(B).
4. Ligand:
PGE × 1
Triethylene glycol
PDB code:
6c1r
(B).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACE-PHE-ORN-PRO-ZAL-TRP-ARG × 2
ACE
=Acetyl group,
ORN
=L-Ornithine,
ZAL
=3-Cyclohexyl-D-Alanine.
PDB codes:
6c1q
(B),
6c1r
(B).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
MLI × 1
Malonate ion
PDB code:
6c1r
(B).
2. Ligand:
OLC × 1
(2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB code:
6c1r
(B).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
OLC × 1
(2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB code:
6c1r
(B).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
OLA × 1
Oleic acid
PDB code:
6c1r
(B).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
OLA × 1
Oleic acid
PDB code:
6c1r
(B).