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Ligand clusters for UniProt code P21730

Ligand clusters for P21730: C5a anaphylatoxin chemotactic receptor 1 from Homo sapiens

Top 6 (of 7) ligand clusters
Cluster 1.
4 ligand types
5 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6c1qB  
JSmol
 

Structures

PDB   Schematic diagram
6c1qB    
6c1rB    

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: OLA × 2
Oleic acid
PDB codes: 6c1r(B),


 
2. Ligand: 9P2 × 1
1-(1,3-Benzodioxol-5-Yl)-~{N}-(1,3-Benzodioxol-5- Ylmethyl)-~{N}-[(3-Butyl-2,5-Diphenyl-Imidazol-4-
Yl) methyl]methanamine
PDB code: 6c1q(B).


 
3. Ligand: EFD × 1
Avacopan
PDB code: 6c1r(B).


 
4. Ligand: PGE × 1
Triethylene glycol
PDB code: 6c1r(B).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: ACE-PHE-ORN-PRO-ZAL-TRP-ARG × 2
ACE=Acetyl group, ORN=L-Ornithine, ZAL=3-Cyclohexyl-D-Alanine.
PDB codes: 6c1q(B), 6c1r(B).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: MLI × 1
Malonate ion
PDB code: 6c1r(B).


 
2. Ligand: OLC × 1
(2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB code: 6c1r(B).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: OLC × 1
(2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB code: 6c1r(B).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: OLA × 1
Oleic acid
PDB code: 6c1r(B).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: OLA × 1
Oleic acid
PDB code: 6c1r(B).

 

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