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EBI
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Structure Databases
PDBsum
Ligand clusters for UniProt code P20480
Ligand clusters for P20480: Protein claret segregational from Drosophila melanogaster
Top 6 (of 14) ligand clusters
Cluster 1.
7 ligand types
32 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1cz7C
Structures
PDB
Schematic diagram
1cz7
C
5hle
A
5hnw
K
5hny
K
3l1c
A
more ...
Cluster 1 contains 7 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 15
PDB codes:
1cz7
(A),
1n6m
(A),
1syj
(A),
1syp
(A),
1sz4
(A),
1sz5
(A),
3l1c
(A),
3u06
(A),
5hnw
(K),
5hny
(K),
5w3d
(A),
2. Ligand:
ADP × 11
Adenosine-5'-Diphosphate
PDB codes:
1cz7
(A),
1n6m
(A),
2ncd
(A),
3l1c
(A),
3u06
(A),
5hle
(A),
5w3d
(A),
3. Ligand:
ANP × 2
Phosphoaminophosphonic acid-Adenylate ester
PDB codes:
5hnw
(K),
5hny
(K).
4. Ligand:
SL2 × 1
3'-Deoxy-2'-O-(2,2,5,5-Tetramethyl-1-Oxyl-Pyrrolin-3- Yl) adenosine 5'-Diphosphate
PDB code:
1sz4
(A).
5. Ligand:
SL3 × 1
2'-Deoxy-3'-O-(2,2,5,5-Tetramethyl-1-Oxyl-Pyrrolin-3- Yl) adenosine 5'-Diphosphate
PDB code:
1sz5
(A).
6. Ligand:
SLN × 1
1-(4-Azido-2-Nitrophenyl)amino-3-(1-Oxyl-2,2,5,5- Tetramethylpyrrolidinyl-3-Carbamido)-2-
Propyldisphosphate
PDB code:
1syp
(A).
7. Ligand:
SSL × 1
(3-{[2-(Dihydroxyamino)-4-(2lambda~5~-Triaza-1,2- Dienyl)phenyl]amino}-9-Hydroxy-8,8,10,10-
Tetramethyl- 1,5-Dioxa-9-Azaspiro[5.5]undec-3-Yl)methyl trihydrogen diphosphate
PDB code:
1syj
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3u06
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3u06
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3u06
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3u06
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
2ncd
(A).