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Ligand clusters for UniProt code P18429

Ligand clusters for P18429: Endo-1,4-beta-xylanase A from Bacillus subtilis (strain 168)

Top 6 (of 15) ligand clusters
Cluster 1.
7 ligand types
11 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5tvyA  
JSmol
 

Structures

PDB   Schematic diagram
5tvyA    
1xxnA    
2qz3A    
5tvvA    
2z79A    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: GOL × 3
glycerin
Glycerol
PDB codes: 2z79(A),


 
2. Ligand: 7V7 × 2
fentanyl
N-Phenyl-N-[1-(2-Phenylethyl)piperidin-4-Yl]propanamide
PDB codes: 5tzo(A),


 
3. Ligand: MES × 2
2-(N-Morpholino)-Ethanesulfonic acid
PDB codes: 3exu(A),


 
4. Ligand: EPE × 1
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB code: 2b45(X).


 
5. Ligand: XPE × 1
3,6,9,12,15,18,21,24,27-Nonaoxanonacosane-1,29-Diol
PDB code: 5tvy(A).


 
6. Ligand: XYP-XYP × 1
XYP=Beta-D-Xylopyranose.
PDB code: 2b46(X).


 
7. Ligand: XYP-XYP-XYP × 1
XYP=Beta-D-Xylopyranose.
PDB code: 2qz3(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: XYP-XYP-XYP × 1
XYP=Beta-D-Xylopyranose.
PDB code: 2qz3(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SRT × 1
S,R meso-Tartaric acid
PDB code: 1xxn(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: TLA × 1
L(+)-Tartaric acid
PDB code: 2dcy(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: TLA × 1
L(+)-Tartaric acid
PDB code: 2dcy(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: TLA × 1
L(+)-Tartaric acid
PDB code: 2dcy(A).

 

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