Ligand clusters for UniProt code P16113

Ligand clusters for P16113: Photoactive yellow protein from Halorhodospira halophila

		Top 6 (of 7) ligand clusters Cluster 1. 5 ligand types 71 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 2 ligands Cluster 5. 1 ligand type 2 ligands Cluster 6. 1 ligand type 2 ligands
Representative protein: 6umzA

Structures

PDB		Schematic diagram
6umzA
6un0A
1f9iA
1f98A
2i9vA
		more ...

Cluster 1 contains 5 ligand types

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Ligand		Description
		1. Ligand: HC4 × 66 4'-Hydroxycinnamic acid PDB codes: 1d7e(A), 1f98(A), 1f9i(A), 1gsv(A), 1gsw(A), 1gsx(A), 1nwz(A), 1odv(A), 1ot6(A), 1ot9(A), 1ota(A), 1otb(A), 1otd(A), 1ote(A), 1oti(A), 1s1y(A), 1s1z(A), 1s4r(A), 1s4s(A), 1t18(A), 1t19(A), 1t1a(A), 1t1b(A), 1t1c(A), 1ts0(A), 1ts6(A), 1ts7(A), 1ts8(A), 1ugu(A), 1uwn(X), 1uwp(X), 1xfn(A), 2d01(A), 2d02(A), 2i9v(A), 2phy(A), 2pyp(A), 2pyr(A), 2qj5(A), 2qj7(A), 2qws(A), 2zoh(A), 2zoi(A), 3phy(A), 3pyp(A), 3umd(A), 3ume(A), 3ve3(A), 3ve4(A), 4b9o(A), 4bbt(A), 4bbu(A), 4bbv(A), 4hy8(A), 4i38(A), 4i39(A), 4i3a(A), 4i3i(A), 4i3j(A), 4wl9(A), 4wla(A), 5gx9(A), 6mkt(A), 6mmd(A), 6umy(A), 6un2(A).
		2. Ligand: QBV × 2 (2e)-3-(3-Bromo-4-Hydroxyphenyl)prop-2-Enoic acid PDB codes: 6umz(A), 6un0(A).
		3. Ligand: DHC × 1 Caffeic acid PDB code: 1kou(A).
		4. Ligand: YAZ × 1 (2e)-3-(3-Chloro-4-Hydroxyphenyl)prop-2-Enoic acid PDB code: 6mhn(A).
		5. Ligand: YYZ × 1 (2e)-3-(3,5-Dichloro-4-Hydroxyphenyl)prop-2-Enoic acid PDB code: 6mhi(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: HC4 × 1 4'-Hydroxycinnamic acid PDB code: 1xfq(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: HC4 × 1 4'-Hydroxycinnamic acid PDB code: 2kx6(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: HC4 × 2 PDB codes: 1otd(A),

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 2 Sulfate ion PDB codes: 1uwn(X), 1uwp(X).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 2 Sulfate ion PDB codes: 1uwn(X), 1uwp(X).