Ligand clusters for UniProt code P15559

Ligand clusters for P15559: NAD(P)H dehydrogenase [quinone] 1 from Homo sapiens

		5 ligand clusters Cluster 1. 13 ligand types 29 ligands Cluster 2. 12 ligand types 31 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand
Representative protein: 1d4aA

Structures

PDB		Schematic diagram
1d4aA
1kbqA
1h66A
1gg5A
1qbgA
		more ...

Cluster 1 contains 13 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: FAD × 17 flavin adenine dinucleotide Flavin-Adenine dinucleotide PDB codes: 1d4a(A), 1dxo(A), 1gg5(A), 1h66(A), 1h69(A), 1kbo(A), 1kbq(A), 1qbg(A), 2f1o(A), 3jsx(A), 4cf6(A), 5a4k(A), 5ea2(A), 5eai(A), 5fuq(A), 6fy4(A), 6llc(A).
		2. Ligand: DQN × 1 Duroquinone PDB code: 1dxo(A).
		3. Ligand: RH1 × 1 2,5-Diaziridin-1-Yl-3-(Hydroxymethyl)-6- Methylcyclohexa-2,5-Diene-1,4-Dione PDB code: 1h66(A).
		4. Ligand: E09 × 1 3-Hydroxymethyl-5-Aziridinyl-1methyl-2-[1h-Indole-4,7- Dione]-Propanol PDB code: 1gg5(A).
		5. Ligand: 340 × 1 5-Methoxy-1,2-Dimethyl-3-(Phenoxymethyl)indole-4,7- Dione PDB code: 1kbo(A).
		6. Ligand: ARH × 1 3-(Hydroxymethyl)-1-Methyl-5-(2- Methylaziridin-1-Yl)-2-Phenyl-1h-Indole-4,7- Dione PDB code: 1h69(A).
		7. Ligand: DTC × 1 Bishydroxy[2h-1-Benzopyran-2-One,1,2-Benzopyrone] PDB code: 2f1o(A).
		8. Ligand: 936 × 1 5-Methoxy-1,2-Dimethyl-3-(4-Nitrophenoxymethyl)indole- 4,7-Dione PDB code: 1kbq(A).
		9. Ligand: DTC × 1 Bishydroxy[2h-1-Benzopyran-2-One,1,2- Benzopyrone] PDB code: 5fuq(A).
		10. Ligand: CBD × 1 Cibacron blue PDB code: 4cf6(A).
		11. Ligand: CC2 × 1 4-Hydroxy-6,7-Dimethyl-3-(Naphthalen-1-Ylmethyl)-2h- Chromen-2-One PDB code: 3jsx(A).
		12. Ligand: EAW × 1 N-(2-Bromophenyl)pyrrolidine-1-Sulfonamide PDB code: 6fy4(A).
		13. Ligand: EHL × 1 5-Methyl-N-(5-Nitro-1,3-Thiazol-2-Yl)-3-Phenyl-1,2- Oxazole-4-Carboxamide PDB code: 6llc(A).

Cluster 2 contains 12 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: FAD × 18 flavin adenine dinucleotide Flavin-Adenine dinucleotide PDB codes: 1d4a(A), 1dxo(A), 1gg5(A), 1h66(A), 1h69(A), 1kbo(A), 1kbq(A), 1qbg(A), 2f1o(A), 3jsx(A), 4cet(A), 4cf6(A), 5a4k(A), 5ea2(A), 5eai(A), 5fuq(A), 6fy4(A), 6llc(A).
		2. Ligand: RH1 × 1 2,5-Diaziridin-1-Yl-3-(Hydroxymethyl)-6- Methylcyclohexa-2,5-Diene-1,4-Dione PDB code: 1h66(A).
		3. Ligand: E09 × 1 3-Hydroxymethyl-5-Aziridinyl-1methyl-2-[1h-Indole-4,7- Dione]-Propanol PDB code: 1gg5(A).
		4. Ligand: 340 × 1 5-Methoxy-1,2-Dimethyl-3-(Phenoxymethyl)indole-4,7- Dione PDB code: 1kbo(A).
		5. Ligand: ARH × 1 3-(Hydroxymethyl)-1-Methyl-5-(2- Methylaziridin-1-Yl)-2-Phenyl-1h-Indole-4,7- Dione PDB code: 1h69(A).
		6. Ligand: DTC × 1 Bishydroxy[2h-1-Benzopyran-2-One,1,2-Benzopyrone] PDB code: 2f1o(A).
		7. Ligand: 936 × 1 5-Methoxy-1,2-Dimethyl-3-(4-Nitrophenoxymethyl)indole- 4,7-Dione PDB code: 1kbq(A).
		8. Ligand: DTC × 3 Bishydroxy[2h-1-Benzopyran-2-One,1,2- Benzopyrone] PDB codes: 4cet(A), 5fuq(A),
		9. Ligand: CBD × 1 Cibacron blue PDB code: 4cf6(A).
		10. Ligand: CC2 × 1 4-Hydroxy-6,7-Dimethyl-3-(Naphthalen-1-Ylmethyl)-2h- Chromen-2-One PDB code: 3jsx(A).
		11. Ligand: EHL × 1 5-Methyl-N-(5-Nitro-1,3-Thiazol-2-Yl)-3-Phenyl-1,2- Oxazole-4-Carboxamide PDB code: 6llc(A).
		12. Ligand: SO4 × 1 Sulfate ion PDB code: 6llc(A).

Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: ACT × 1 Acetate ion PDB code: 5fuq(A).

Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: ACT × 1 Acetate ion PDB code: 5fuq(A).

Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: ACT × 1 Acetate ion PDB code: 5fuq(A).