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Ligand clusters for UniProt code P15309

Ligand clusters for P15309: Prostatic acid phosphatase from Homo sapiens

6 ligand clusters
Cluster 1.
4 ligand types
4 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
5 ligand types
5 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1cviA  
JSmol
 

Structures

PDB   Schematic diagram
1cviA    
2hpaA    
1nd6A    
1nd5A    

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code: 2hpa(A).


 
2. Ligand: NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 1nd5(A).


 
3. Ligand: NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose, FUC=Alpha-L-Fucopyranose.
PDB code: 1cvi(A).


 
4. Ligand: NAG-NAG-MAN-MAN × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 1nd6(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG-NAG × 3
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 1nd5(A), 1nd6(A), 2hpa(A).


 
2. Ligand: NAG-NAG-BMA-MAN × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 1cvi(A).

 

 Cluster 3 contains 5 ligand types

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 1nd6(A).


 
2. Ligand: GLY × 1
glycine
PDB code: 1cvi(A).


 
3. Ligand: PT3 × 1
N-Propyl-Tartramic acid
PDB code: 2hpa(A).


 
4. Ligand: 2BF × 1
Alpha-Benzyl-Aminobenzyl-Phosphonic acid
PDB code: 1nd5(A).


 
5. Ligand: 1PE × 1
Pentaethylene glycol
PDB code: 1nd5(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: 1PE × 2
Pentaethylene glycol
PDB codes: 1nd5(A), 1nd6(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: 1PE × 1
Pentaethylene glycol
PDB code: 1nd5(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code: 1cvi(A).

 

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