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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P12807
Ligand clusters for P12807: Peroxisomal primary amine oxidase from Pichia angusta
Top 6 (of 27) ligand clusters
Cluster 1.
2 ligand types
10 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
6 ligands
Cluster 5.
1 ligand type
9 ligands
Cluster 6.
1 ligand type
5 ligands
Representative protein: 3sxxA
Structures
PDB
Schematic diagram
3sxx
A
1ekm
A
1a2v
A
3t0u
A
4kff
A
more ...
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 9
glycerin
Glycerol
PDB codes:
2oov
(A),
2oqe
(A),
3sx1
(A),
3sxx
(A),
4ev2
(A),
4ev5
(A),
4kfd
(A),
4kfe
(A),
4kff
(A).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
3nbj
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
2oqe
(A),
3sxx
(A).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
3nbj
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
ABN × 1
Benzylamine
PDB code:
4ev5
(A).
_Xe
2. Metal:
_XE × 1
PDB code:
2oqe
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 6
glycerin
Glycerol
PDB codes:
2oov
(A),
2oqe
(A),
3sx1
(A),
3sxx
(A),
4kfd
(A),
4kfe
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 9
glycerin
Glycerol
PDB codes:
2oov
(A),
2oqe
(A),
3sxx
(A),
3t0u
(A),
4ev2
(A),
4ev5
(A),
4kfd
(A),
4kfe
(A),
4kff
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
GOL × 5
glycerin
Glycerol
PDB codes:
2oov
(A),
2oqe
(A),
3sxx
(A),
4kfd
(A),
4kfe
(A).