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Ligand clusters for UniProt code P12333

Ligand clusters for P12333: Chlorophyll a-b binding protein, chloroplastic from Spinacia oleracea

5 ligand clusters
Cluster 1.
7 ligand types
66 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 1rwtA  
JSmol
 

Structures

PDB   Schematic diagram
1rwtA    
3jcuG    
4lczA    

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: LUT × 6
lutein
(3r,3'R,6s)-4,5-Didehydro-5,6-Dihydro-Beta,Beta- Carotene-3,3'-Diol
PDB codes: 1rwt(A), 3jcu(G), 4lcz(A),


 
2. Ligand: CLA × 27
Chlorophyll a
PDB codes: 1rwt(A), 3jcu(G), 4lcz(A),


 
3. Ligand: CHL × 22
Chlorophyll b
PDB codes: 1rwt(A), 3jcu(G), 4lcz(A),


 
4. Ligand: LHG × 3
1,2-Dipalmitoyl-Phosphatidyl-Glycerole
PDB codes: 1rwt(A), 3jcu(G), 4lcz(A).


 
5. Ligand: NEX × 3
(1r,3r)-6-{(3e,5e,7e,9e,11e,13e,15e,17e)-18-[(1s,4r, 6r)-4-Hydroxy-2,2,6-Trimethyl-7-
Oxabicyclo[4.1.0]hept- 1-Yl]-3,7,12,16-Tetramethyloctadeca-1,3,5,7,9,11,13, 15,17-Nonaenylidene}-
1,5,5-Trimethylcyclohexane-1,3- Diol
PDB codes: 1rwt(A), 3jcu(G), 4lcz(A).


 
6. Ligand: XAT × 3
(3s,5r,6s,3'S,5'R,6'S)-5,6,5',6'-Diepoxy-5,6,5',6'- Tetrahydro-Beta,Beta-Carotene-3,3'-Diol
PDB codes: 1rwt(A), 3jcu(G),


 
7. Ligand: DGD × 2
Digalactosyl diacyl glycerol (dgdg)
PDB codes: 1rwt(A),

 

 Cluster 2 contains 2 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 1
PDB code: 4lcz(A).


 
2. Ligand: CAC × 1
Cacodylate ion
PDB code: 4lcz(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 1
PDB code: 4lcz(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 1
PDB code: 4lcz(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Na
 
1. Metal: _NA × 1
PDB code: 4lcz(A).

 

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