Ligand clusters for UniProt code P10372

Ligand clusters for P10372: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

		Top 6 (of 11) ligand clusters Cluster 1. 5 ligand types 33 ligands Cluster 2. 3 ligand types 11 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 2 ligand types 5 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 6 ligands
Representative protein: 5abtA

Structures

PDB		Schematic diagram
5abtA
5ac7A
5ab3A
5ac6A
5ahiA
		more ...

Cluster 1 contains 5 ligand types

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Ligand		Description
		1. Ligand: SO4 × 16 Sulfate ion PDB codes: 5ac6(A), 5ac7(A), 5ac8(A), 5g1y(A), 5g2h(A), 5g2w(A), 5g4e(A), 5l6u(A), 5l9f(A).
		2. Ligand: PO4 × 9 Phosphate ion PDB codes: 5ahe(A), 5ahi(A), 5g1t(A), 5g2i(A), 5g5i(A),
		3. Ligand: GUO × 5 [(2r,3s,4r,5r)-5-[4-Aminocarbonyl-5-[(E)- [[(2r,3r,4s,5r)-3,4-Bis(oxidanyl)-5- (Phosphonooxymethyl)oxolan-2-Yl]amino]methylideneamino imidazol-1-Yl]-3,4-Bis(oxidanyl)oxolan-2- Yl] methyl dihydrogen phosphate PDB codes: 5a5w(A), 5abt(A), 5ahf(A), 5ahi(A), 5g4w(A).
_Na		4. Metal: _NA × 2 PDB codes: 5ahe(A), 5g2i(A).
		5. Ligand: 2ER × 1 [(2r,3s,4r,5r)-5-[4-Aminocarbonyl-5-[[(Z)-[(3r,4r)-3,4- Dihydroxy-2-Oxo-5-Phosphonooxy- Pentyl]iminomethyl]amino]imidazol-1-Yl]-3,4-Dihydroxy- Oxolan-2-Yl]methyl dihydrogen phosphate PDB code: 5ab3(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
_Na		1. Metal: _NA × 5 PDB codes: 5ab3(A), 5ac7(A), 5g4e(A), 5l9f(A).
		2. Ligand: EPE × 3 4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid PDB codes: 5ahe(A), 5g1t(A), 5g5i(A).
		3. Ligand: SO4 × 3 Sulfate ion PDB codes: 5ac8(A), 5g1y(A), 5g2h(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: PO4 × 1 Phosphate ion PDB code: 5ahe(A).
		2. Ligand: SO4 × 1 Sulfate ion PDB code: 5g2h(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 3 glycerin Glycerol PDB codes: 5g1y(A), 5g4e(B).
		2. Ligand: ACY × 2 acetic acid Acetic acid PDB codes: 5g4e(A),

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 5ac7(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 6 glycerin Glycerol PDB codes: 5ahe(A), 5ahf(A), 5g2h(A), 5g4w(A).