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Ligand clusters for UniProt code P0DJL7

Ligand clusters for P0DJL7: Diphtheria toxin repressor from Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis)

2 ligand clusters
Cluster 1.
5 ligand types
17 ligands
Cluster 2.
2 ligand types
9 ligands
Representative protein: 1c0wB  
JSmol
 

Structures

PDB   Schematic diagram
1c0wB    
2qqaA    
2qqbA    
2qq9A    
2dtrA    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 1
PDB code: 1bi3(B).

_Ni
 
2. Metal: _NI × 7
PDB codes: 1ddn(A), 1f5t(A), 2qq9(A), 2qqa(A), 2qqb(A), 2tdx(A), 3glx(A).


 
3. Ligand: PO4 × 4
Phosphate ion
PDB codes: 2qq9(A), 2qqa(A), 2qqb(A), 3glx(A).

_Co
 
4. Metal: _CO × 3
PDB codes: 1c0w(A), 2dtr(A).


 
5. Ligand: SO4 × 2
Sulfate ion
PDB codes: 1bi3(B), 2dtr(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description

_Ni
 
1. Metal: _NI × 7
PDB codes: 1ddn(A), 1f5t(A), 1xcv(A), 2qq9(A), 2qqa(A), 2qqb(A), 2tdx(A).

_Co
 
2. Metal: _CO × 2
PDB codes: 1c0w(A),

 

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