Ligand clusters for UniProt code P0AG30

Ligand clusters for P0AG30: Transcription termination factor Rho from Escherichia coli (strain K12)

		6 ligand clusters Cluster 1. 8 ligand types 21 ligands Cluster 2. 7 ligand types 27 ligands Cluster 3. 2 ligand types 6 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 6wa8A

Structures

PDB		Schematic diagram
6wa8A
5jjkA
5jjiA
5jjlA
1pvoA
		more ...

Cluster 1 contains 8 ligand types

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Ligand		Description
		1. Ligand: ADP × 6 Adenosine-5'-Diphosphate PDB codes: 3ice(A), 5jji(A), 5jjk(A), 5jjl(A), 6duq(L).
		2. Ligand: BEF × 6 Beryllium trifluoride ion PDB codes: 3ice(A), 5jji(A), 5jjk(A), 5jjl(A), 6duq(L).
		3. Ligand: AGS × 3 Phosphothiophosphoric acid-Adenylate ester PDB codes: 1xpo(A), 1xpr(A), 1xpu(A).
		4. Ligand: ANP × 2 Phosphoaminophosphonic acid-Adenylate ester PDB codes: 1pvo(A),
		5. Ligand: ATP × 1 Adenosine-5'-Triphosphate PDB code: 6wa8(A).
		6. Ligand: BCM × 1 Bicyclomycin PDB code: 1xpo(A).
		7. Ligand: FPD × 1 5a-(3-Formylphenylsulfanyl)-Dihydrobicyclomycin PDB code: 1xpu(A).
		8. Ligand: _FB × 1 5a-Formylbicyclomycin PDB code: 1xpr(A).

Cluster 2 contains 7 ligand types

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Ligand		Description
_Mg		1. Metal: _MG × 8 PDB codes: 1xpo(A), 1xpr(A), 1xpu(A), 3ice(A), 5jji(A), 5jjk(A), 5jjl(A).
		2. Ligand: ADP × 6 Adenosine-5'-Diphosphate PDB codes: 3ice(A), 5jji(A), 5jjk(A), 5jjl(A), 6duq(L).
		3. Ligand: BEF × 6 Beryllium trifluoride ion PDB codes: 3ice(A), 5jji(A), 5jjk(A), 5jjl(A), 6duq(L).
		4. Ligand: AGS × 3 Phosphothiophosphoric acid-Adenylate ester PDB codes: 1xpo(A), 1xpr(A), 1xpu(A).
		5. Ligand: ANP × 2 Phosphoaminophosphonic acid-Adenylate ester PDB codes: 1pvo(A),
		6. Ligand: ATP × 1 Adenosine-5'-Triphosphate PDB code: 6wa8(A).
		7. Ligand: SO4 × 1 Sulfate ion PDB code: 2ht1(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: __U-__C × 5 PDB codes: 1pvo(A), 1xpo(A), 1xpr(A), 1xpu(A), 2ht1(A).
		2. Ligand: _DC-_DC × 1 PDB code: 1pv4(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: SPD × 1 Spermidine PDB code: 3ice(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
_Cu		1. Metal: _CU × 1 PDB code: 1a8v(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
_Cu		1. Metal: _CU × 1 PDB code: 1a8v(A).