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Ligand clusters for UniProt code P0AEE5

Ligand clusters for P0AEE5: D-galactose-binding periplasmic protein from Escherichia coli (strain K12)

6 ligand clusters
Cluster 1.
5 ligand types
11 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1glgA  
JSmol
 

Structures

PDB   Schematic diagram
1glgA    
2qw1A    
2fw0A    
2fvyA    
2ipmA    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: CIT × 1
citric acid
Citric acid
PDB code: 2fw0(A).


 
2. Ligand: GAL × 1
galactose
Beta-D-Galactopyranose
PDB code: 1glg(A).


 
3. Ligand: BGC × 6
Beta-D-Glucopyranose
PDB codes: 2fvy(A), 2gbp(A), 2hph(A), 2ipl(A), 2ipm(A), 2ipn(A).

_Na
 
4. Metal: _NA × 2
PDB codes: 2fw0(A),


 
5. Ligand: 3MG × 1
3-O-Methyl-Beta-D-Glucopyranose
PDB code: 2qw1(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: MLA × 1
Malonic acid
PDB code: 2fw0(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2fvy(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: ACT × 1
Acetate ion
PDB code: 2fvy(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 1
PDB code: 2fw0(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Na
 
1. Metal: _NA × 1
PDB code: 2fw0(A).

 

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