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PDBsum
Ligand clusters for UniProt code P0AEE5
Ligand clusters for P0AEE5: D-galactose-binding periplasmic protein from Escherichia coli (strain K12)
6 ligand clusters
Cluster 1.
5 ligand types
11 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1glgA
Structures
PDB
Schematic diagram
1glg
A
2qw1
A
2fw0
A
2fvy
A
2ipm
A
more ...
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
CIT × 1
citric acid
Citric acid
PDB code:
2fw0
(A).
2. Ligand:
GAL × 1
galactose
Beta-D-Galactopyranose
PDB code:
1glg
(A).
3. Ligand:
BGC × 6
Beta-D-Glucopyranose
PDB codes:
2fvy
(A),
2gbp
(A),
2hph
(A),
2ipl
(A),
2ipm
(A),
2ipn
(A).
_Na
4. Metal:
_NA × 2
PDB codes:
2fw0
(A),
5. Ligand:
3MG × 1
3-O-Methyl-Beta-D-Glucopyranose
PDB code:
2qw1
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
MLA × 1
Malonic acid
PDB code:
2fw0
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
2fvy
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACT × 1
Acetate ion
PDB code:
2fvy
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Ca
1. Metal:
_CA × 1
PDB code:
2fw0
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Na
1. Metal:
_NA × 1
PDB code:
2fw0
(A).