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Ligand clusters for UniProt code P0ABT2

Ligand clusters for P0ABT2: DNA protection during starvation protein from Escherichia coli (strain K12)

Top 6 (of 7) ligand clusters
Cluster 1.
2 ligand types
6 ligands
Cluster 2.
1 ligand type
6 ligands
Cluster 3.
1 ligand type
6 ligands
Cluster 4.
3 ligand types
3 ligands
Cluster 5.
3 ligand types
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1dpsA  
JSmol
 

Structures

PDB   Schematic diagram
1dpsA    
1jreA    
1f33A    
1l8iA    
6qvxA    
 more ...

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: TRS × 4
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes: 1jre(A), 1jts(A), 1l8h(A), 1l8i(A).


 
2. Ligand: SO4 × 2
Sulfate ion
PDB codes: 6qvx(A),

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: TRS × 6
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes: 1f30(A), 1f33(A), 1jre(A), 1jts(A), 1l8h(A), 1l8i(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: TRS × 6
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes: 1f30(A), 1f33(A), 1jre(A), 1jts(A), 1l8h(A), 1l8i(A).

 

 Cluster 4 contains 3 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 1
PDB code: 1f30(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 6qvx(A).

_Cd
 
3. Metal: _CD × 1
PDB code: 1jre(A).

 

 Cluster 5 contains 3 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 1
PDB code: 1f30(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 6qvx(A).

_Cd
 
3. Metal: _CD × 1
PDB code: 1jre(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 6qvx(A).

 

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