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EBI
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PDBsum
Ligand clusters for UniProt code P0ABT2
Ligand clusters for P0ABT2: DNA protection during starvation protein from Escherichia coli (strain K12)
Top 6 (of 7) ligand clusters
Cluster 1.
2 ligand types
6 ligands
Cluster 2.
1 ligand type
6 ligands
Cluster 3.
1 ligand type
6 ligands
Cluster 4.
3 ligand types
3 ligands
Cluster 5.
3 ligand types
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1dpsA
Structures
PDB
Schematic diagram
1dps
A
1jre
A
1f33
A
1l8i
A
6qvx
A
more ...
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
TRS × 4
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes:
1jre
(A),
1jts
(A),
1l8h
(A),
1l8i
(A).
2. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
6qvx
(A),
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
TRS × 6
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes:
1f30
(A),
1f33
(A),
1jre
(A),
1jts
(A),
1l8h
(A),
1l8i
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
TRS × 6
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes:
1f30
(A),
1f33
(A),
1jre
(A),
1jts
(A),
1l8h
(A),
1l8i
(A).
Cluster 4 contains 3 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 1
PDB code:
1f30
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6qvx
(A).
_Cd
3. Metal:
_CD × 1
PDB code:
1jre
(A).
Cluster 5 contains 3 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 1
PDB code:
1f30
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6qvx
(A).
_Cd
3. Metal:
_CD × 1
PDB code:
1jre
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6qvx
(A).