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Ligand clusters for UniProt code P0A9T0

Ligand clusters for P0A9T0: D-3-phosphoglycerate dehydrogenase OS=Escherichia coli (strain K12) GN=serA PE=1 SV=2

Top 6 (of 9) ligand clusters
Cluster 1.
4 ligand types
8 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
4 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1ybaA  
JSmol
 

Structures

PDB   Schematic diagram
1ybaA    
1sc6A    
2pa3A    
1psdA    
2p9gA    
 more ...

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: NAD × 2
Nicotinamide-Adenine-Dinucleotide
PDB codes: 1sc6(A), 1yba(A).


 
2. Ligand: AKG × 1
2-Oxoglutaric acid
PDB code: 1yba(A).


 
3. Ligand: NAI × 4
nadh
1,4-Dihydronicotinamide adenine dinucleotide
PDB codes: 2p9c(A), 2p9e(A), 2p9g(A), 2pa3(A).


 
4. Ligand: NAD × 1
Nicotinamide-Adenine-Dinucleotide
PDB code: 1psd(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: AKG × 1
2-Oxoglutaric acid
PDB code: 1yba(A).


 
2. Ligand: CIT × 1
Citric acid
PDB code: 2p9e(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: CIT × 1
Citric acid
PDB code: 2p9e(A).


 
2. Ligand: UNL × 1
Unknown ligand
PDB code: 1yba(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: CIT × 1
Citric acid
PDB code: 2p9e(A).


 
2. Ligand: UNL × 1
Unknown ligand
PDB code: 1yba(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SER × 4
PDB codes: 2pa3(A), 1psd(A), 2p9c(A), 2p9g(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SER × 1
PDB code: 2p9g(A).

 

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