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Ligand clusters for UniProt code P0A9B2

Ligand clusters for P0A9B2: Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli (strain K12) OX=83333 GN=gapA PE=1 SV=2

Top 6 (of 11) ligand clusters
Cluster 1.
6 ligand types
10 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
3 ligand types
5 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1dc4A  
JSmol
 

Structures

PDB   Schematic diagram
1dc4A    
1dc6A    
1gadO    
6io6A    
6utmA    
 more ...

 

 Cluster 1 contains 6 ligand types

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Ligand Description


 
1. Ligand: NAD × 3
Nicotinamide-Adenine-Dinucleotide
PDB codes: 1dc6(A), 1gad(O), 1gae(O).


 
2. Ligand: G3P × 1
Sn-Glycerol-3-Phosphate
PDB code: 1dc4(A).


 
3. Ligand: MES × 1
2-(N-Morpholino)-Ethanesulfonic acid
PDB code: 1s7c(A).


 
4. Ligand: SO4 × 2
Sulfate ion
PDB codes: 1s7c(A),


 
5. Ligand: NAD × 2
Nicotinamide-Adenine-Dinucleotide
PDB codes: 2vyn(A), 2vyv(A).

_Ag
 
6. Metal: _AG × 1
PDB code: 6io4(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: TRE × 3
Trehalose
PDB codes: 5za0(A), 6utn(A), 6uto(A).

 

 Cluster 3 contains 3 ligand types

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1s7c(A).


 
2. Ligand: G3P × 3
Sn-Glycerol-3-Phosphate
PDB codes: 6utm(A), 6utn(A), 6uto(A).


 
3. Ligand: SO4 × 1
Sulfate ion
PDB code: 5za0(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1s7c(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1s7c(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: ACT × 1
Acetate ion
PDB code: 6utn(A).

 

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