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Ligand clusters for UniProt code P0A7E9

Ligand clusters for P0A7E9: Uridylate kinase OS=Escherichia coli (strain K12) GN=pyrH PE=1 SV=2

Top 6 (of 8) ligand clusters
Cluster 1.
4 ligand types
4 ligands
Cluster 2.
3 ligand types
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
6 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 2bndA  
JSmol
 

Structures

PDB   Schematic diagram
2bndA    
2v4yA    
2bnfA    
2bneA    

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: GTP × 1
Guanosine-5'-Triphosphate
PDB code: 2v4y(A).


 
2. Ligand: U5P × 1
Uridine-5'-Monophosphate
PDB code: 2bne(A).


 
3. Ligand: UDP × 1
Uridine-5'-Diphosphate
PDB code: 2bnd(A).


 
4. Ligand: UTP × 1
Uridine 5'-Triphosphate
PDB code: 2bnf(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
Glycerol
PDB codes: 2bne(A), 2bnf(A).


 
2. Ligand: GTP × 1
Guanosine-5'-Triphosphate
PDB code: 2v4y(A).


 
3. Ligand: POP × 1
Pyrophosphate 2-
PDB code: 2bnd(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GTP × 1
Guanosine-5'-Triphosphate
PDB code: 2v4y(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GTP × 1
Guanosine-5'-Triphosphate
PDB code: 2v4y(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 6
Glycerol
PDB codes: 2bnd(A), 2bne(A), 2bnf(A),

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
Glycerol
PDB codes: 2bnd(A), 2bnf(A).

 

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