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Ligand clusters for UniProt code P0A445

Ligand clusters for P0A445: Photosystem Q(B) protein 1 OS=Synechococcus elongatus GN=psbA1 PE=3 SV=1

6 ligand clusters
Cluster 1.
7 ligand types
10 ligands
Cluster 2.
6 ligand types
12 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 2axtA  
JSmol
 

Structures

PDB   Schematic diagram
2axtA    

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: BCR × 2
Beta-Carotene
PDB codes: 2axt(A),


 
2. Ligand: CLA × 2
Chlorophyll a
PDB codes: 2axt(A),


 
3. Ligand: LMT × 2
Dodecyl-Beta-D-Maltoside
PDB codes: 2axt(A),


 
4. Ligand: DGD × 1
Digalactosyl diacyl glycerol (dgdg)
PDB code: 2axt(A).


 
5. Ligand: MGE × 1
(1s)-2-(Alpha-L-Allopyranosyloxy)-1-[(Tridecanoyloxy) methyl]ethyl palmitate
PDB code: 2axt(A).


 
6. Ligand: SQD × 1
1,2-Di-O-Acyl-3-O-[6-Deoxy-6-Sulfo-Alpha-D- Glucopyranosyl]-Sn-Glycerol
PDB code: 2axt(A).


 
7. Ligand: UNK × 1
PDB code: 2axt(A).

 

 Cluster 2 contains 6 ligand types

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Ligand Description


 
1. Ligand: CLA × 4
Chlorophyll a
PDB codes: 2axt(A),


 
2. Ligand: DGD × 2
Digalactosyl diacyl glycerol (dgdg)
PDB codes: 2axt(A),


 
3. Ligand: MGE × 2
(1s)-2-(Alpha-L-Allopyranosyloxy)-1-[(Tridecanoyloxy) methyl]ethyl palmitate
PDB codes: 2axt(A),


 
4. Ligand: PHO × 2
Pheophytin a
PDB codes: 2axt(A),


 
5. Ligand: PQ9 × 1
5-[(2e,6e,10e,14e,18e,22e)-3,7,11,15,19,23,27- Heptamethyloctacosa-2,6,10,14,18,22,26-Heptaenyl]-
2,3- Dimethylbenzo-1,4-Quinone
PDB code: 2axt(A).


 
6. Ligand: UNK × 1
PDB code: 2axt(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: LHG × 1
1,2-Dipalmitoyl-Phosphatidyl-Glycerole
PDB code: 2axt(A).


 
2. Ligand: SQD × 1
1,2-Di-O-Acyl-3-O-[6-Deoxy-6-Sulfo-Alpha-D- Glucopyranosyl]-Sn-Glycerol
PDB code: 2axt(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: UNK × 2
PDB codes: 2axt(A),

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: BCT × 1
Bicarbonate ion
PDB code: 2axt(A).

Fe2
 
2. Metal: FE2 × 1
PDB code: 2axt(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: OEC × 1
Oxygen evolving system
PDB code: 2axt(A).

 

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