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EBI
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Ligand clusters for UniProt code P08773
Ligand clusters for P08773: Deoxycytidylate 5-hydroxymethyltransferase OS=Enterobacteria phage T4 GN=42 PE=1 SV=1
3 ligand clusters
Cluster 1.
4 ligand types
7 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Representative protein: 1b5dA
Structures
PDB
Schematic diagram
1b5d
A
6l18
A
1b5e
A
6a9a
A
6a9b
A
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Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
DCM × 3
2'-Deoxycytidine-5'-Monophosphate
PDB codes:
1b5d
(A),
1b5e
(A),
6a9a
(A).
2. Ligand:
PO4 × 2
Phosphate ion
PDB codes:
1b49
(A),
6a9b
(A).
3. Ligand:
THG × 1
(6s)-5,6,7,8-Tetrahydrofolate
PDB code:
6a9a
(A).
4. Ligand:
TMP × 1
Thymidine-5'-Phosphate
PDB code:
6l18
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
DCM × 2
2'-Deoxycytidine-5'-Monophosphate
PDB codes:
1b5d
(A),
1b5e
(A).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
1b49
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
_Na
1. Metal:
_NA × 1
PDB code:
6l18
(A).