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EBI
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PDBsum
Ligand clusters for UniProt code P08559
Ligand clusters for P08559: Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Homo sapiens OX=9606 GN=PDHA1 PE=1 SV=3
3 ligand clusters
Cluster 1.
6 ligand types
15 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
1 ligand
Representative protein: 3exeA
Structures
PDB
Schematic diagram
3exe
A
2ozl
A
1ni4
A
6cfo
A
3exf
A
more ...
Cluster 1 contains 6 ligand types
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Ligand
Description
1. Ligand:
TPP × 2
Thiamine diphosphate
PDB codes:
1ni4
(A),
2ozl
(A).
_Mg
2. Metal:
_MG × 4
PDB codes:
1ni4
(A),
2ozl
(A),
3exf
(A),
6cfo
(A).
_Mn
3. Metal:
_MN × 3
PDB codes:
3exe
(A),
3exh
(A),
4. Ligand:
TDP × 1
cocarboxylase
Thiamin diphosphate
PDB code:
6cer
(A).
5. Ligand:
TPP × 4
Thiamine diphosphate
PDB codes:
3exe
(A),
3exf
(A),
3exh
(A),
6. Ligand:
A5X × 1
3-[(4-Amino-2-Methylpyrimidin-5-Yl)methyl]-2-{(1s)-1- Hydroxy-1-[(R)-Hydroxy(oxo)-Lambda~5~-
Phosphanyl]ethyl}-5-(2-{[(S)-Hydroxy(phosphonooxy) phosphoryl]oxy}ethyl)-4-Methyl-1,3-Thiazol-3-
Ium
PDB code:
6cfo
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
3exe
(A),
3exh
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3exh
(A).