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Ligand clusters for UniProt code P08559

Ligand clusters for P08559: Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Homo sapiens OX=9606 GN=PDHA1 PE=1 SV=3

3 ligand clusters
Cluster 1.
6 ligand types
15 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
1 ligand
Representative protein: 3exeA  
JSmol
 

Structures

PDB   Schematic diagram
3exeA    
2ozlA    
1ni4A    
6cfoA    
3exfA    
 more ...

 

 Cluster 1 contains 6 ligand types

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Ligand Description


 
1. Ligand: TPP × 2
Thiamine diphosphate
PDB codes: 1ni4(A), 2ozl(A).

_Mg
 
2. Metal: _MG × 4
PDB codes: 1ni4(A), 2ozl(A), 3exf(A), 6cfo(A).

_Mn
 
3. Metal: _MN × 3
PDB codes: 3exe(A), 3exh(A),


 
4. Ligand: TDP × 1
cocarboxylase
Thiamin diphosphate
PDB code: 6cer(A).


 
5. Ligand: TPP × 4
Thiamine diphosphate
PDB codes: 3exe(A), 3exf(A), 3exh(A),


 
6. Ligand: A5X × 1
3-[(4-Amino-2-Methylpyrimidin-5-Yl)methyl]-2-{(1s)-1- Hydroxy-1-[(R)-Hydroxy(oxo)-Lambda~5~-
Phosphanyl]ethyl}-5-(2-{[(S)-Hydroxy(phosphonooxy) phosphoryl]oxy}ethyl)-4-Methyl-1,3-Thiazol-3-
Ium
PDB code: 6cfo(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 3exe(A), 3exh(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3exh(A).

 

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