Ligand clusters for UniProt code P08253

Ligand clusters for P08253: 72 kDa type IV collagenase OS=Homo sapiens GN=MMP2 PE=1 SV=2

		Top 6 (of 10) ligand clusters Cluster 1. 2 ligand types 6 ligands Cluster 2. 2 ligand types 3 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 3 ligands Cluster 5. 3 ligand types 7 ligands Cluster 6. 1 ligand type 5 ligands
Representative protein: 1gxdA

Structures

PDB		Schematic diagram
1gxdA
1ck7A
1eakA
1genA
1qibA
		more ...

Cluster 1 contains 2 ligand types

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Ligand		Description
_Zn		1. Metal: _ZN × 5 PDB codes: 1ck7(A), 1eak(A), 1gxd(A), 1qib(A), 3ayu(A).
		2. Ligand: ILE-SER-TYR-GLY-ASN-ASP-ALA-LEU-MET-PRO × 1 PDB code: 3ayu(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: SO4 × 2 Sulfate ion PDB codes: 1eak(A), 1gxd(A).
		2. Ligand: GLY-PRO-ALA-GLY-PRO-PRO-GLY-ALA × 1 PDB code: 1eak(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 1ck7(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 3 Sulfate ion PDB codes: 1ck7(A), 1eak(A), 1gxd(A).

Cluster 5 contains 3 ligand types

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Ligand		Description
_Ca		1. Metal: _CA × 4 PDB codes: 1ck7(A), 1gen(A), 1rtg(A),
_Na		2. Metal: _NA × 2 PDB codes: 1ck7(A), 1gen(A).
_Cl		3. Metal: _CL × 1 PDB code: 1gen(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
_Ca		1. Metal: _CA × 5 PDB codes: 1ck7(A), 1eak(A), 1gxd(A), 1qib(A), 3ayu(A).