Ligand clusters for UniProt code P08200

Ligand clusters for P08200: Isocitrate dehydrogenase [NADP] OS=Escherichia coli (strain K12) GN=icd PE=1 SV=1

		4 ligand clusters Cluster 1. 18 ligand types 61 ligands Cluster 2. 1 ligand type 7 ligands Cluster 3. 1 ligand type 2 ligands Cluster 4. 1 ligand type 12 ligands
Representative protein: 1p8fA

Structures

PDB		Schematic diagram
1p8fA
1groA
8icdA
1grpA
1bl5A
		more ...

Cluster 1 contains 18 ligand types

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Ligand		Description
		1. Ligand: ICT × 8 Isocitric acid PDB codes: 1cw1(A), 1cw7(A), 1gro(A), 1grp(A), 1p8f(A), 1pb1(A), 5icd(A), 8icd(A).
		2. Ligand: NAP × 4 Nadp nicotinamide-Adenine-Dinucleotide phosphate PDB codes: 1ai2(A), 1bl5(A), 1hj6(A), 9icd(A).
		3. Ligand: AKG × 3 2-Oxoglutaric acid PDB codes: 1bl5(A), 1cw4(A), 1ika(A).
		4. Ligand: NDO × 1 Nicotinamide-(6-Deamino-6-Hydroxy-Adenine)-Dinucleotide phosphate PDB code: 1ai3(A).
		5. Ligand: ICA × 1 Isocitrate calcium complex PDB code: 1ai2(A).
		6. Ligand: IPM × 1 3-Isopropylmalic acid PDB code: 1hj6(A).
		7. Ligand: ICT × 7 Isocitric acid PDB codes: 1ai3(A), 1ide(A), 4aj3(A), 4aja(A), 4ajb(A), 4ajs(A), 4bnp(A).
_Mg		8. Metal: _MG × 14 PDB codes: 1ai3(A), 1bl5(A), 1gro(A), 1grp(A), 1hj6(A), 1idc(A), 1ide(A), 1p8f(A), 4ajb(A), 4ajr(A), 4ajs(A), 4bnp(A), 5icd(A), 8icd(A).
		9. Ligand: NAP × 3 Nadp nicotinamide-Adenine-Dinucleotide phosphate PDB codes: 1ide(A), 4aj3(A), 4ajr(A).
		10. Ligand: AKG × 2 2-Oxoglutaric acid PDB codes: 4ajc(A), 4ajr(A).
_Ca		11. Metal: _CA × 4 PDB codes: 1ika(A), 4aj3(A), 4aja(A), 4ajc(A).
		12. Ligand: SO4 × 3 Sulfate ion PDB codes: 1iso(A), 1pb3(A).
		13. Ligand: A2P × 2 Adenosine-2'-5'-Diphosphate PDB codes: 4ajc(A), 4ajs(A).
		14. Ligand: NMN × 2 Beta-Nicotinamide ribose monophosphate PDB codes: 4ajr(A), 4ajs(A).
		15. Ligand: TAP × 2 7-Thionicotinamide-Adenine-Dinucleotide phosphate PDB codes: 4aja(A), 4ajb(A).
_Mn		16. Metal: _MN × 2 PDB codes: 1cw1(A), 1cw4(A).
		17. Ligand: NAD × 1 Nicotinamide-Adenine-Dinucleotide PDB code: 1iso(A).
		18. Ligand: OXS × 1 2-Oxalosuccinic acid PDB code: 1idc(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 7 Glycerol PDB codes: 1hj6(A), 1p8f(A), 1pb1(A), 1pb3(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 2 Glycerol PDB codes: 1p8f(A), 1pb1(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 12 Sulfate ion PDB codes: 1cw1(A), 1cw4(A), 1cw7(A), 1iso(A), 1p8f(A), 1pb1(A), 1pb3(A), 4aja(A), 4ajb(A), 4ajc(A), 4ajs(A), 4bnp(A).