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Ligand clusters for UniProt code P07987
Ligand clusters for P07987: Exoglucanase 2 OS=Hypocrea jecorina GN=cbh2 PE=1 SV=1
Top 6 (of 21) ligand clusters
Cluster 1.
8 ligand types
13 ligands
Cluster 2.
2 ligand types
37 ligands
Cluster 3.
3 ligand types
11 ligands
Cluster 4.
3 ligand types
9 ligands
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
2 ligand types
10 ligands
Representative protein: 4i5rA
Structures
PDB
Schematic diagram
4i5r
A
1hgw
A
1cb2
A
1qk2
A
1qk0
A
more ...
Cluster 1 contains 8 ligand types
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Ligand
Description
1. Ligand:
GLC × 2
Alpha-D-Glucose
PDB codes:
1hgy
(A),
2. Ligand:
GOL × 1
Glycerol
PDB code:
1qjw
(A).
3. Ligand:
EDO × 4
1,2-Ethanediol
PDB codes:
4i5r
(A),
4i5u
(A),
4. Ligand:
MGL-SGC-GLC-GLC × 2
MGL
=O1-Methyl-Glucose,
SGC
=4-Deoxy-4-Thio-Beta-D-Glucopyranose,
GLC
=Alpha-D-Glucose.
PDB codes:
1qjw
(A),
1qk2
(A).
5. Ligand:
4MU-BGC-BGC-BGC-BGC × 1
4MU
=7-Hydroxy-4-Methyl-2h-Chromen-2-One,
BGC
=Beta-D-Glucose.
PDB code:
4ax7
(A).
6. Ligand:
IOB-XYP-BGC × 1
XYP
=Beta-D-Xylopyranose,
BGC
=Beta-D-Glucose,
IOB
=3-Iodo-Benzyl alcohol.
PDB code:
1qk0
(A).
7. Ligand:
UWU-BGC-BGC × 1
BGC
=Beta-D-Glucose,
UWU
=6-Chloranyl-7-Oxidanyl-4-Phenyl-Chromen-2-One.
PDB code:
4ax6
(A).
8. Ligand:
XZZ-BGC-BGC × 1
BGC
=Beta-D-Glucose,
XZZ
=6-Chloro-7-Hydroxy-4-Methyl-2h-Chromen-2-One.
PDB code:
4au0
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
MAN × 36
Alpha-D-Mannose
PDB codes:
1cb2
(A),
1hgw
(A),
1hgy
(A),
1qjw
(A),
1qk0
(A),
1qk2
(A),
4au0
(A),
4ax6
(A),
4ax7
(A),
2. Ligand:
PG4 × 1
Tetraethylene glycol
PDB code:
4i5r
(A).
Cluster 3 contains 3 ligand types
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Ligand
Description
1. Ligand:
NAG × 9
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes:
1cb2
(A),
1hgw
(A),
1hgy
(A),
1qjw
(A),
1qk0
(A),
1qk2
(A),
4au0
(A),
4ax6
(A),
4ax7
(A).
2. Ligand:
ACT × 1
acetic acid
Acetate ion
PDB code:
4i5u
(A).
3. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4i5u
(A).
Cluster 4 contains 3 ligand types
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Ligand
Description
1. Ligand:
MAN × 5
Alpha-D-Mannose
PDB codes:
1cb2
(A),
1hgw
(A),
1qjw
(A),
1qk0
(A),
1qk2
(A).
2. Ligand:
BMA × 1
Beta-D-Mannose
PDB code:
1hgy
(A).
3. Ligand:
MAN × 3
Alpha-D-Mannose
PDB codes:
4au0
(A),
4ax6
(A),
4ax7
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
PG4 × 1
Tetraethylene glycol
PDB code:
4i5u
(A).
2. Ligand:
PGE × 1
Triethylene glycol
PDB code:
4i5r
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG × 9
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes:
1cb2
(A),
1hgw
(A),
1hgy
(A),
1qjw
(A),
1qk0
(A),
1qk2
(A),
4au0
(A),
4ax6
(A),
4ax7
(A).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4i5u
(A).