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EBI
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Structure Databases
PDBsum
Ligand clusters for UniProt code P07788
Ligand clusters for P07788: Spore coat protein A OS=Bacillus subtilis (strain 168) OX=224308 GN=cotA PE=1 SV=4
Top 6 (of 33) ligand clusters
Cluster 1.
2 ligand types
4 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
3 ligand types
4 ligands
Cluster 4.
2 ligand types
12 ligands
Cluster 5.
2 ligand types
7 ligands
Cluster 6.
2 ligand types
26 ligands
Representative protein: 4akoA
Structures
PDB
Schematic diagram
4ako
A
5zlk
A
2wsd
A
4akq
A
1w8e
A
more ...
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
EDO × 3
1,2-Ethanediol
PDB codes:
4a66
(A),
4ako
(A),
4akp
(A).
2. Ligand:
EBS × 1
3-Ethyl-2-[(2z)-2-(3-Ethyl-6-Sulfo-1,3-Benzothiazol- 2(3h)-Ylidene)hydrazino]-6-Sulfo-3h-1,3-
Benzothiazol- 1-Ium
PDB code:
4yvn
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
EBS × 2
3-Ethyl-2-[(2z)-2-(3-Ethyl-6-Sulfo-1,3-Benzothiazol- 2(3h)-Ylidene)hydrazino]-6-Sulfo-3h-1,3-
Benzothiazol- 1-Ium
PDB codes:
1of0
(A),
3zdw
(A).
Cluster 3 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1gsk
(A).
2. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
4ako
(A),
4akq
(A).
3. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
2x88
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
EDO × 11
1,2-Ethanediol
PDB codes:
2wsd
(A),
4a66
(A),
4ako
(A),
4akp
(A),
4yvn
(A),
4yvu
(A),
5zlj
(A),
5zlk
(A),
5zll
(A),
5zlm
(A).
2. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
2x88
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1gsk
(A).
2. Ligand:
EDO × 6
1,2-Ethanediol
PDB codes:
2wsd
(A),
4a66
(A),
4ako
(A),
4akp
(A),
4akq
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 14
glycerin
Glycerol
PDB codes:
1gsk
(A),
1of0
(A),
1w6l
(A),
1w6w
(A),
1w8e
(A),
2bhf
(A),
3zdw
(A),
4yvn
(A),
4yvu
(A),
5zlj
(A),
5zlk
(A),
5zll
(A),
5zlm
(A).
2. Ligand:
EDO × 12
1,2-Ethanediol
PDB codes:
2wsd
(A),
4a66
(A),
4ako
(A),
4akp
(A),
4akq
(A),
4yvn
(A),
4yvu
(A),
5zlj
(A),
5zlk
(A),
5zll
(A),
5zlm
(A),