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PDBsum
Ligand clusters for UniProt code P07221
Ligand clusters for P07221: Calsequestrin-1 OS=Oryctolagus cuniculus GN=CASQ1 PE=1 SV=1
Top 6 (of 12) ligand clusters
Cluster 1.
3 ligand types
5 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 3trpA
Structures
PDB
Schematic diagram
3trp
A
3us3
A
3trq
A
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
MPD × 3
(4s)-2-Methyl-2,4-Pentanediol
PDB codes:
3trp
(A),
3trq
(A),
3us3
(A).
2. Ligand:
NAG-NAG-BMA-MAN × 1
NAG
=N-Acetyl-D-Glucosamine,
BMA
=Beta-D-Mannose,
MAN
=Alpha-D-Mannose.
PDB code:
3trq
(A).
_Na
3. Metal:
_NA × 1
PDB code:
3trq
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
MRD × 2
(4r)-2-Methylpentane-2,4-Diol
PDB codes:
3trp
(A),
3trq
(A).
2. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
3us3
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes:
3trq
(A),
3us3
(A).
2. Ligand:
MRD × 1
(4r)-2-Methylpentane-2,4-Diol
PDB code:
3trp
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
MRD × 3
(4r)-2-Methylpentane-2,4-Diol
PDB codes:
3trp
(A),
3trq
(A),
3us3
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Na
1. Metal:
_NA × 2
PDB codes:
3trp
(A),
3trq
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Ca
1. Metal:
_CA × 3
PDB codes:
3trp
(A),
3trq
(A),
3us3
(A).