spacer
spacer

Ligand clusters for UniProt code P07221

Ligand clusters for P07221: Calsequestrin-1 OS=Oryctolagus cuniculus GN=CASQ1 PE=1 SV=1

Top 6 (of 12) ligand clusters
Cluster 1.
3 ligand types
5 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 3trpA  
JSmol
 

Structures

PDB   Schematic diagram
3trpA    
3us3A    
3trqA    

 

 Cluster 1 contains 3 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: MPD × 3
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 3trp(A), 3trq(A), 3us3(A).


 
2. Ligand: NAG-NAG-BMA-MAN × 1
NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose.
PDB code: 3trq(A).

_Na
 
3. Metal: _NA × 1
PDB code: 3trq(A).

 

 Cluster 2 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: MRD × 2
(4r)-2-Methylpentane-2,4-Diol
PDB codes: 3trp(A), 3trq(A).


 
2. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 3us3(A).

 

 Cluster 3 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 3trq(A), 3us3(A).


 
2. Ligand: MRD × 1
(4r)-2-Methylpentane-2,4-Diol
PDB code: 3trp(A).

 

 Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: MRD × 3
(4r)-2-Methylpentane-2,4-Diol
PDB codes: 3trp(A), 3trq(A), 3us3(A).

 

 Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description

_Na
 
1. Metal: _NA × 2
PDB codes: 3trp(A), 3trq(A).

 

 Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description

_Ca
 
1. Metal: _CA × 3
PDB codes: 3trp(A), 3trq(A), 3us3(A).

 

spacer

spacer