Ligand clusters for UniProt code P06007

Ligand clusters for P06007: Photosystem II D2 protein from Chlamydomonas reinhardtii

		4 ligand clusters Cluster 1. 7 ligand types 14 ligands Cluster 2. 2 ligand types 5 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 2 ligand types 2 ligands
Representative protein: 6kacD

Structures

PDB		Schematic diagram
6kacD

Cluster 1 contains 7 ligand types

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Ligand		Description
		1. Ligand: BCR × 1 beta carotene Beta-Carotene PDB code: 6kac(D).
		2. Ligand: CLA × 4 Chlorophyll a PDB codes: 6kac(D),
		3. Ligand: LHG × 3 1,2-Dipalmitoyl-Phosphatidyl-Glycerole PDB codes: 6kac(D),
		4. Ligand: LMG × 2 1,2-Distearoyl-Monogalactosyl-Diglyceride PDB codes: 6kac(D),
		5. Ligand: PHO × 2 Pheophytin a PDB codes: 6kac(D),
		6. Ligand: DGD × 1 Digalactosyl diacyl glycerol (dgdg) PDB code: 6kac(D).
		7. Ligand: PL9 × 1 2,3-Dimethyl-5-(3,7,11,15,19,23,27,31,35-Nonamethyl-2, 6,10,14,18,22,26,30,34- Hexatriacontanonaenyl-2,5- Cyclohexadiene-1,4-Dione-2,3-Dimethyl-5-Solanesyl-1,4- Benzoquinone PDB code: 6kac(D).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: CLA × 4 Chlorophyll a PDB codes: 6kac(D),
		2. Ligand: LMG × 1 1,2-Distearoyl-Monogalactosyl-Diglyceride PDB code: 6kac(D).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: LHG × 1 1,2-Dipalmitoyl-Phosphatidyl-Glycerole PDB code: 6kac(D).
		2. Ligand: SQD × 1 1,2-Di-O-Acyl-3-O-[6-Deoxy-6-Sulfo-Alpha-D- Glucopyranosyl]-Sn-Glycerol PDB code: 6kac(D).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: BCT × 1 Bicarbonate ion PDB code: 6kac(D).
Fe2		2. Metal: FE2 × 1 PDB code: 6kac(D).