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Ligand clusters for UniProt code P05310

Ligand clusters for P05310: Photosystem I P700 chlorophyll a apoprotein A1 OS=Pisum sativum GN=psaA PE=1 SV=2

Top 6 (of 7) ligand clusters
Cluster 1.
11 ligand types
621 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
4 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
4 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5l8rA  
JSmol
 

Structures

PDB   Schematic diagram
5l8rA    
4xk8A    
1yo9A    
4y28A    
4rkuA    
 more ...

 

 Cluster 1 contains 11 ligand types

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Ligand Description


 
1. Ligand: BCR × 79
beta carotene
Beta-Carotene
PDB codes: 1yo9(A), 2o01(A), 2wsc(A), 2wse(A), 2wsf(A), 3lw5(A), 4rku(A), 4xk8(A), 4y28(A), 5l8r(A),


 
2. Ligand: PQN × 9
phylloquinone
Phylloquinone
PDB codes: 1yo9(A), 2o01(A), 2wsc(A), 2wse(A), 3lw5(A), 4rku(A), 4xk8(A), 4y28(A), 5l8r(A).


 
3. Ligand: LUT × 1
lutein
(3r,3'R,6s)-4,5-Didehydro-5,6-Dihydro-Beta,Beta- Carotene-3,3'-Diol
PDB code: 5l8r(A).


 
4. Ligand: CLA × 456
Chlorophyll a
PDB codes: 2o01(A), 2wsc(A), 2wse(A), 2wsf(A), 3lw5(A), 4rku(A), 4xk8(A), 4y28(A), 5l8r(A),


 
5. Ligand: CL1 × 56
Alpha chlorophyll a
PDB codes: 1yo9(A),


 
6. Ligand: LHG × 10
1,2-Dipalmitoyl-Phosphatidyl-Glycerole
PDB codes: 1yo9(A), 4rku(A), 4xk8(A), 4y28(A), 5l8r(A),


 
7. Ligand: LMU × 4
Dodecyl-Alpha-D-Maltoside
PDB codes: 2wsc(A), 2wse(A), 2wsf(A), 3lw5(A).


 
8. Ligand: CL0 × 3
Chlorophyll a isomer
PDB codes: 4rku(A), 4y28(A), 5l8r(A).


 
9. Ligand: HTG × 1
Heptyl 1-Thiohexopyranoside
PDB code: 4xk8(A).


 
10. Ligand: LMT × 1
Dodecyl-Beta-D-Maltoside
PDB code: 5l8r(A).

_Ca
 
11. Metal: _CA × 1
PDB code: 5l8r(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: CLA × 1
Chlorophyll a
PDB code: 4rku(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: LMU × 4
Dodecyl-Alpha-D-Maltoside
PDB codes: 2wsc(A), 2wse(A), 2wsf(A), 3lw5(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: LMU × 2
Dodecyl-Alpha-D-Maltoside
PDB codes: 2wsc(A), 2wse(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: LMU × 4
Dodecyl-Alpha-D-Maltoside
PDB codes: 2wsc(A), 2wse(A), 2wsf(A), 3lw5(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: LMU × 1
Dodecyl-Alpha-D-Maltoside
PDB code: 2wse(A).

 

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