Ligand clusters for UniProt code P04958

Ligand clusters for P04958: Tetanus toxin from Clostridium tetani (strain Massachusetts / E88)

		Top 6 (of 26) ligand clusters Cluster 1. 8 ligand types 10 ligands Cluster 2. 8 ligand types 8 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 5n0cA

Structures

PDB		Schematic diagram
5n0cA
5n0bA
7by5A
1fv3A
1dllA
		more ...

Cluster 1 contains 8 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 1dll(A), 3hmy(A).
		2. Ligand: BGC-GAL-NGA-GAL-SIA-SLB-SIA × 2 BGC=Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose, NGA=2-Acetamido-2-Deoxy-Beta-D-Galactopyranose, SIA=N-Acetyl-Alpha-Neuraminic acid, SLB=N-Acetyl-Beta-Neuraminic acid. PDB codes: 1fv2(A), 1fv3(A).
		3. Ligand: BGC-GAL × 1 BGC=Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose. PDB code: 1dll(A).
		4. Ligand: BGC-GAL-NGA-GAL-SIA × 1 BGC=Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose, NGA=2-Acetamido-2-Deoxy-Beta-D-Galactopyranose, SIA=N-Acetyl-Alpha-Neuraminic acid. PDB code: 5n0c(A).
		5. Ligand: BGC-GAL-NGA-GAL-SIA-SIA × 1 BGC=Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose, NGA=2-Acetamido-2-Deoxy-Beta-D-Galactopyranose, SIA=N-Acetyl-Alpha-Neuraminic acid. PDB code: 5n0b(A).
		6. Ligand: BTB × 1 2-[Bis-(2-Hydroxy-Ethyl)-Amino]-2-Hydroxymethyl- Propane-1,3-Diol PDB code: 7by4(A).
		7. Ligand: GLA × 1 Alpha-D-Galactopyranose PDB code: 3hn1(A).
		8. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 5n0c(A).

Cluster 2 contains 8 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 1dll(A).
		2. Ligand: A2G × 1 2-Acetamido-2-Deoxy-Alpha-D-Galactopyranose PDB code: 1d0h(A).
		3. Ligand: BGC-GLA-SIA-SIA × 1 BGC=Beta-D-Glucopyranose, GLA=Alpha-D-Galactopyranose, SIA=N-Acetyl-Alpha-Neuraminic acid. PDB code: 1yyn(A).
		4. Ligand: SIA-SIA × 1 SIA=N-Acetyl-Alpha-Neuraminic acid. PDB code: 3hn1(A).
		5. Ligand: SIA-SIA-SIA × 1 SIA=N-Acetyl-Alpha-Neuraminic acid. PDB code: 3hmy(A).
		6. Ligand: SLB × 1 N-Acetyl-Beta-Neuraminic acid PDB code: 1dfq(A).
		7. Ligand: SO4 × 1 Sulfate ion PDB code: 1d0h(A).
		8. Ligand: TYR-GLU-TRP × 1 PDB code: 1yxw(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GAL × 1 galactose Beta-D-Galactopyranose PDB code: 1diw(A).
		2. Ligand: GOL × 1 glycerin Glycerol PDB code: 1dll(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: A2G × 1 2-Acetamido-2-Deoxy-Alpha-D-Galactopyranose PDB code: 1d0h(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: EPE × 1 4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid PDB code: 7by5(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 5n0b(A).