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Ligand clusters for UniProt code P04179

Ligand clusters for P04179: Superoxide dismutase [Mn], mitochondrial OS=Homo sapiens GN=SOD2 PE=1 SV=2

5 ligand clusters
Cluster 1.
2 ligand types
8 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
3 ligand types
34 ligands
Representative protein: 5t30A  
JSmol
 

Structures

PDB   Schematic diagram
5t30A    
7kksA    
7kkwA    
2gdsA    
1ap5A    
 more ...

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: PO4 × 4
Phosphate ion
PDB codes: 5t30(A), 5vf9(A), 7kku(A), 7klb(A).


 
2. Ligand: SO4 × 4
Sulfate ion
PDB codes: 1em1(A), 1ja8(A), 1luw(A), 1n0n(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 1ja8(A), 3c3s(A), 3c3t(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1n0n(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 5t30(A).

 

 Cluster 5 contains 3 ligand types

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Ligand Description

Mn3
 
1. Metal: MN3 × 2
PDB codes: 1pm9(A), 1var(A).

_Mn
 
2. Metal: _MN × 30
PDB codes: 1ap5(A), 1ap6(A), 1em1(A), 1ja8(A), 1luv(A), 1luw(A), 1msd(A), 1n0j(A), 1n0n(A), 1pl4(A), 1qnm(A), 1szx(A), 1xdc(A), 1xil(A), 1zsp(A), 1zte(A), 1zuq(A), 2adp(A), 2adq(B), 2gds(A), 2p4k(A), 2qka(A), 2qkc(A), 3c3s(A), 3c3t(A), 5gxo(A), 5t30(A), 5vf9(A), 7kkw(A), 7klb(A).

Mn3
 
3. Metal: MN3 × 2
PDB codes: 7kks(A), 7kku(A).

 

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