Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P04179
Ligand clusters for P04179: Superoxide dismutase [Mn], mitochondrial OS=Homo sapiens GN=SOD2 PE=1 SV=2
5 ligand clusters
Cluster 1.
2 ligand types
8 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
3 ligand types
34 ligands
Representative protein: 5t30A
Structures
PDB
Schematic diagram
5t30
A
7kks
A
7kkw
A
2gds
A
1ap5
A
more ...
Cluster 1 contains 2 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
PO4 × 4
Phosphate ion
PDB codes:
5t30
(A),
5vf9
(A),
7kku
(A),
7klb
(A).
2. Ligand:
SO4 × 4
Sulfate ion
PDB codes:
1em1
(A),
1ja8
(A),
1luw
(A),
1n0n
(A).
Cluster 2 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
1ja8
(A),
3c3s
(A),
3c3t
(A).
Cluster 3 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1n0n
(A).
Cluster 4 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
PO4 × 1
Phosphate ion
PDB code:
5t30
(A).
Cluster 5 contains 3 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
Mn3
1. Metal:
MN3 × 2
PDB codes:
1pm9
(A),
1var
(A).
_Mn
2. Metal:
_MN × 30
PDB codes:
1ap5
(A),
1ap6
(A),
1em1
(A),
1ja8
(A),
1luv
(A),
1luw
(A),
1msd
(A),
1n0j
(A),
1n0n
(A),
1pl4
(A),
1qnm
(A),
1szx
(A),
1xdc
(A),
1xil
(A),
1zsp
(A),
1zte
(A),
1zuq
(A),
2adp
(A),
2adq
(B),
2gds
(A),
2p4k
(A),
2qka
(A),
2qkc
(A),
3c3s
(A),
3c3t
(A),
5gxo
(A),
5t30
(A),
5vf9
(A),
7kkw
(A),
7klb
(A).
Mn3
3. Metal:
MN3 × 2
PDB codes:
7kks
(A),
7kku
(A).