Ligand clusters for UniProt code P02743

Ligand clusters for P02743: Serum amyloid P-component OS=Homo sapiens GN=APCS PE=1 SV=2

		Top 6 (of 11) ligand clusters Cluster 1. 10 ligand types 32 ligands Cluster 2. 1 ligand type 7 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 1gykA

Structures

PDB		Schematic diagram
1gykA
2a3yA
2a3wA
2w08A
4avtA
		more ...

Cluster 1 contains 10 ligand types

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Ligand		Description
_Ca		1. Metal: _CA × 20 PDB codes: 1gyk(A), 1sac(A), 2a3w(A), 2a3x(A), 2a3y(A), 2w08(A), 3kqr(A), 4avs(A), 4avt(A), 4ayu(A),
		2. Ligand: CPJ × 2 Bis-1,2-{[(Z)-2-Carboxy-2-Methyl-1,3-Dioxane]-5- Yloxycarbamoyl}-Ethane PDB codes: 2a3w(A), 2a3y(A).
		3. Ligand: GHE × 2 (2r)-1-[6-[(2r)-2-Carboxypyrrolidin-1-Yl]-6- Oxidanylidene-Hexanoyl]pyrrolidine-2- Carboxylic acid PDB codes: 4avt(A), 4avv(A).
_Cd		4. Metal: _CD × 2 PDB codes: 4avv(A),
		5. Ligand: ACY × 1 Acetic acid PDB code: 1sac(A).
		6. Ligand: CDG × 1 Methyl 4,6-O-[(1r)-1-Carboxyethylidene]-Beta- D-Galactopyranoside PDB code: 1gyk(A).
		7. Ligand: N7P × 1 1-Acetyl-D-Proline PDB code: 4avs(A).
		8. Ligand: N8P × 1 N-Acetyl-D-Proline PDB code: 4ayu(A).
		9. Ligand: OPE × 1 Phosphoric acid mono-(2-Amino-Ethyl) ester PDB code: 3kqr(A).
		10. Ligand: TPO × 1 Phosphothreonine PDB code: 2w08(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: NAG × 7 n-acetyl-d-glucosamine N-Acetyl-D-Glucosamine PDB codes: 2w08(A), 3d5o(A), 3kqr(A), 4avs(A), 4avt(A), 4avv(A), 4ayu(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 Glycerol PDB code: 3d5o(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 3d5o(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 3d5o(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 3d5o(A).