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Ligand clusters for UniProt code P01865
Ligand clusters for P01865: Ig gamma-2A chain C region, membrane-bound form from Mus musculus
6 ligand clusters
Cluster 1.
12 ligand types
27 ligands
Cluster 2.
5 ligand types
12 ligands
Cluster 3.
2 ligand types
7 ligands
Cluster 4.
1 ligand type
7 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1ncwH
Structures
PDB
Schematic diagram
1ncw
H
1yee
H
1lo0
Y
3fo9
H
1flr
H
more ...
Cluster 1 contains 12 ligand types
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Ligand
Description
1. Ligand:
BEZ × 7
benzoic acid
Benzoic acid
PDB codes:
1ncw
(H),
1ru9
(H),
1rua
(H),
1ruk
(H),
1rul
(H),
1rum
(H),
1rup
(H).
2. Ligand:
GOL × 6
glycerin
Glycerol
PDB codes:
1ncw
(H),
1ru9
(H),
1ruk
(H),
1rul
(H),
1rum
(H),
1rup
(H).
3. Ligand:
FLU × 2
fluorescein
2-(6-Hydroxy-3-Oxo-3h-Xanthen-9-Yl)-Benzoic acid
PDB codes:
1flr
(H),
4fab
(H).
4. Ligand:
ACY × 1
acetic acid
Acetic acid
PDB code:
1ndg
(B).
5. Ligand:
ACT × 4
Acetate ion
PDB codes:
1ru9
(H),
1rua
(H),
1ruk
(H),
1rul
(H).
6. Ligand:
BC1 × 1
3-{[(9-Cyano-9,10-Dihydro-10-Methylacridin-9-Yl) carbonyl]amino}propanoic acid
PDB code:
1lo0
(Y).
7. Ligand:
DIK × 1
5-{[4-(5-Methyl-3-Oxohex-4-En-1-Yl)phenyl]amino}-5- Oxopentanoic acid
PDB code:
3fo9
(H).
8. Ligand:
DP4 × 1
(1s,4s)-4-[Dimethyl(phenyl)silyl]-1-Methylpiperidine 1- Oxide
PDB code:
1nd0
(B).
9. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
4fab
(H).
10. Ligand:
PNB × 1
4-Nitro-Benzylphosphonobutanoyl-Glycine
PDB code:
1yee
(H).
11. Ligand:
SER-HIS-PHE-ASN-GLU-TYR-GLU × 1
PDB code:
1e4w
(H).
_Cl
12. Metal:
_CL × 1
PDB code:
1e4w
(H).
Cluster 2 contains 5 ligand types
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Ligand
Description
1. Ligand:
GOL × 7
glycerin
Glycerol
PDB codes:
1ncw
(H),
1ru9
(H),
1rua
(H),
1ruk
(H),
1rul
(H),
1rum
(H),
1rup
(H).
2. Ligand:
NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code:
6uqc
(C).
3. Ligand:
FUC × 2
Alpha-L-Fucopyranose
PDB codes:
6uqc
(C),
4. Ligand:
NAG-NAG-BMA-MAN-NAG-MAN × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB code:
6uqc
(C).
5. Ligand:
NAG-NAG-BMA-MAN-NAG-MAN-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB code:
6uqc
(E).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 6
glycerin
Glycerol
PDB codes:
1ncw
(H),
1ru9
(H),
1rua
(H),
1ruk
(H),
1rul
(H),
1rup
(H).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1nd0
(B).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 7
glycerin
Glycerol
PDB codes:
1ncw
(H),
1ru9
(H),
1rua
(H),
1ruk
(H),
1rul
(H),
1rum
(H),
1rup
(H).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1ru9
(H).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Cd
1. Metal:
_CD × 1
PDB code:
1orq
(B).