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Ligand clusters for UniProt code P00962

Ligand clusters for P00962: Glutamine--tRNA ligase OS=Escherichia coli (strain K12) OX=83333 GN=glnS PE=1 SV=3

5 ligand clusters
Cluster 1.
7 ligand types
22 ligands
Cluster 2.
1 ligand type
8 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Representative protein: 4jyzA  
JSmol
 

Structures

PDB   Schematic diagram
4jyzA    
1gtsA    
1qruA    
1qrsA    
1gtrA    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: ATP × 4
Adenosine-5'-Triphosphate
PDB codes: 1gtr(A), 1qrs(A), 1qrt(A), 1qru(A).


 
2. Ligand: AMP × 3
Adenosine monophosphate
PDB codes: 1gts(A), 1o0b(A), 1zjw(A).


 
3. Ligand: GLN × 2
l-glutamine
PDB codes: 1o0b(A), 1zjw(A).


 
4. Ligand: QSI × 4
5'-O-[N-(L-Glutaminyl)-Sulfamoyl]adenosine
PDB codes: 1euq(A), 1euy(A), 1qtq(A), 2rd2(A).


 
5. Ligand: GSU × 1
O5'-(L-Glutamyl-Sulfamoyl)-Adenosine
PDB code: 2re8(A).


 
6. Ligand: ATP × 3
Adenosine-5'-Triphosphate
PDB codes: 4jxx(A), 4jxz(A), 4jyz(A).


 
7. Ligand: SO4 × 5
Sulfate ion
PDB codes: 1o0b(A), 1qtq(A), 1zjw(A), 2rd2(A), 2re8(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 8
Sulfate ion
PDB codes: 1o0b(A), 1qtq(A), 1zjw(A), 2rd2(A), 2re8(A), 4jxx(A), 4jxz(A), 4jyz(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1qtq(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1qtq(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 4jxz(A), 4jyz(A).

 

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