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EBI
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PDBsum
Ligand clusters for UniProt code P00924
Ligand clusters for P00924: Enolase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ENO1 PE=1 SV=3
5 ligand clusters
Cluster 1.
16 ligand types
55 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 2xgzA
Structures
PDB
Schematic diagram
2xgz
A
2xh2
A
2one
A
1ebg
A
1p43
A
more ...
Cluster 1 contains 16 ligand types
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Ligand
Description
1. Ligand:
2PG × 6
2-Phosphoglyceric acid
PDB codes:
1p43
(A),
2al1
(A),
2al2
(A),
2one
(A),
5enl
(A),
7enl
(A).
2. Ligand:
PEP × 3
Phosphoenolpyruvate
PDB codes:
1p48
(A),
2al1
(A),
2al2
(A).
_Zn
3. Metal:
_ZN × 2
PDB codes:
4enl
(A),
6enl
(A).
_Li
4. Metal:
_LI × 1
PDB code:
2one
(A).
5. Ligand:
PGA × 1
2-Phosphoglycolic acid
PDB code:
6enl
(A).
6. Ligand:
PO4 × 1
Phosphate ion
PDB code:
1nel
(A).
7. Ligand:
PAH × 3
Phosphonoacetohydroxamic acid
PDB codes:
1ebg
(A),
1els
(A),
1l8p
(A).
8. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
3enl
(A),
4enl
(A).
_Mg
9. Metal:
_MG × 24
PDB codes:
1ebg
(A),
1ebh
(A),
1l8p
(A),
1nel
(A),
1one
(A),
1p43
(A),
1p48
(A),
2al1
(A),
2al2
(A),
2one
(A),
2xgz
(A),
2xh0
(A),
2xh2
(A),
2xh4
(A),
2xh7
(A),
7enl
(A).
10. Ligand:
2PG × 4
2-Phosphoglyceric acid
PDB codes:
2xh2
(A),
2xh4
(A),
2xh7
(A).
11. Ligand:
PEP × 2
Phosphoenolpyruvate
PDB codes:
2xgz
(A),
2xh0
(A).
_Mn
12. Metal:
_MN × 2
PDB codes:
1els
(A),
13. Ligand:
PEP-2PG × 1
PEP
=Phosphoenolpyruvate,
2PG
=2-Phosphoglyceric acid.
PDB code:
1one
(A).
_Ca
14. Metal:
_CA × 1
PDB code:
5enl
(A).
_Cl
15. Metal:
_CL × 1
PDB code:
1ebh
(A).
__F
16. Metal:
__F × 1
PDB code:
1nel
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
_Mg
1. Metal:
_MG × 2
PDB codes:
2xgz
(A),
2xh7
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
2xh4
(B).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
2xh7
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
2xh7
(A).