Ligand clusters for UniProt code P00138

Ligand clusters for P00138: Cytochrome c' OS=Alcaligenes xylosoxydans xylosoxydans OX=85698 PE=1 SV=2

		4 ligand clusters Cluster 1. 6 ligand types 52 ligands Cluster 2. 2 ligand types 5 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 4 ligands
Representative protein: 2xm4A

Structures

PDB		Schematic diagram
2xm4A
5ngxA
5jslA
3ztzA
1e86A
		more ...

Cluster 1 contains 6 ligand types

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Ligand		Description
		1. Ligand: ASC × 6 ascorbic acid Ascorbic acid PDB codes: 2yld(A), 2ylg(A), 3zwi(A), 4cip(A), 5jsl(A), 5jt4(A).
		2. Ligand: HEC × 25 Heme c PDB codes: 1cgn(A), 1cgo(A), 1e83(A), 1e84(A), 1e86(A), 2xl8(A), 2xld(A), 2xlh(A), 2xm0(A), 2xm4(A), 2ykz(A), 2yli(A), 3zqv(A), 3zwi(A), 4cda(A), 4cdv(A), 4cdy(A), 4cip(A), 4cjo(A), 4wgy(A), 4wgz(A), 5jp7(A), 5jsl(A), 5jt4(A), 5jve(A).
		3. Ligand: SO4 × 11 Sulfate ion PDB codes: 2xld(A), 2ykz(A), 2yld(A), 2ylg(A), 3zqv(A), 3zwi(A), 4cda(A), 4cdv(A), 4cip(A), 5jsl(A), 5jt4(A).
		4. Ligand: HEC-CMO × 8 HEC=Heme c, CMO=Carbon monoxide. PDB codes: 2yl0(A), 2yl1(A), 2yl7(A), 2yld(A), 2ylg(A), 3zqy(A), 3ztm(A), 3ztz(A).
		5. Ligand: CMO-HEC × 1 CMO=Carbon monoxide, HEC=Heme c. PDB code: 2yl3(A).
		6. Ligand: HEC-NO2 × 1 HEC=Heme c, NO2=Nitrite ion. PDB code: 5ngx(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 5ngx(A).
		2. Ligand: SO4 × 4 Sulfate ion PDB codes: 2yl3(A), 2yld(A), 2ylg(A), 5jsl(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 2xld(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 4 Sulfate ion PDB codes: 2xlh(A), 2ykz(A), 3zqv(A), 4cda(A).