spacer
spacer

Ligand clusters for UniProt code O75936

Ligand clusters for O75936: Gamma-butyrobetaine dioxygenase OS=Homo sapiens GN=BBOX1 PE=1 SV=1

Top 6 (of 21) ligand clusters
Cluster 1.
15 ligand types
35 ligands
Cluster 2.
2 ligand types
8 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3o2gA  
JSmol
 

Structures

PDB   Schematic diagram
3o2gA    
4bg1A    
4bgkA    
4bhiA    
4bhfA    
 more ...

 

 Cluster 1 contains 15 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts: select all/none invert selection.
Ligand Description

_Zn
 
1. Metal: _ZN × 8
PDB codes: 3o2g(A), 4bg1(A), 4bgk(A), 4bgm(A), 4bhf(A), 4bhg(A), 4bhi(A), 4c5w(A).


 
2. Ligand: OGA × 10
N-Oxalylglycine
PDB codes: 3ms5(A), 3o2g(A), 4bg1(A), 4bgk(A), 4bgm(A), 4bhf(A), 4bhg(A), 4bhi(A), 4c5w(A), 4cwd(A).


 
3. Ligand: EDO × 3
1,2-Ethanediol
PDB codes: 3ms5(A), 4c8r(A).

_Ni
 
4. Metal: _NI × 3
PDB codes: 3ms5(A), 4c8r(A), 4cwd(A).


 
5. Ligand: 449 × 1
4-Carboxy-1,1-Dimethylpiperidin-1-Ium
PDB code: 4cwd(A).


 
6. Ligand: 6YT × 1
N-(3-Hydroxypicolinoyl)-S-(Pyridin-2- Ylmethyl)-L-Cysteine
PDB code: 4c8r(A).


 
7. Ligand: C2T × 1
3-(1-Ethyl-1,1-Dimethylhydrazin-1-Ium-2-Yl) propanoic acid
PDB code: 4bhg(A).


 
8. Ligand: DLT × 1
3-Carboxy-N-(2-Fluoroethyl)-N,N- Dimethylpropan-1-Aminium
PDB code: 4bgm(A).


 
9. Ligand: IVL × 1
1-(3-Carboxypropyl)-1-Methylpyrrolidin-1-Ium
PDB code: 4bg1(A).


 
10. Ligand: MZT × 1
4-(Trimethylammonio)pentanoic acid
PDB code: 4bhf(A).


 
11. Ligand: NM2 × 1
3-Carboxy-N,N,N-Trimethylpropan-1-Aminium
PDB code: 3o2g(A).


 
12. Ligand: NM3 × 1
Ethyl-Dimethyl-(4-Oxidanyl-4-Oxidanylidene- Butyl)azanium
PDB code: 4c5w(A).


 
13. Ligand: REE × 1
2-(2-Carboxyethyl)-1,1,1-Trimethyldiazanium
PDB code: 3ms5(A).


 
14. Ligand: RTK × 1
Trimethyl(3-Oxidanylphosphonoylpropyl)azanium
PDB code: 4bgk(A).


 
15. Ligand: RUJ × 1
3-(1,1,1,2-Tetramethylhydrazin-1-Ium-2-Yl) propanoate
PDB code: 4bhi(A).

 

 Cluster 2 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: 16D × 7
Hexane-1,6-Diamine
PDB codes: 4bg1(A), 4bgk(A), 4bgm(A), 4bhf(A), 4bhg(A), 4bhi(A), 4c5w(A).


 
2. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 4cwd(A).

 

 Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3n6w(A).

 

 Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3n6w(A).

 

 Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3n6w(A).

 

 Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3n6w(A).

 

spacer

spacer