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EBI
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Ligand clusters for UniProt code O67883
Ligand clusters for O67883: Thiamine-monophosphate kinase OS=Aquifex aeolicus (strain VF5) GN=thiL PE=1 SV=1
4 ligand clusters
Cluster 1.
6 ligand types
22 ligands
Cluster 2.
5 ligand types
9 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 3c9uA
Structures
PDB
Schematic diagram
3c9u
A
3c9t
A
3c9s
A
3c9r
A
1vqv
A
Cluster 1 contains 6 ligand types
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Ligand
Description
1. Ligand:
ATP × 1
adenosine triphosphate
Adenosine-5'-Triphosphate
PDB code:
3c9r
(A).
_Mg
2. Metal:
_MG × 16
PDB codes:
3c9r
(A),
3c9s
(A),
3c9t
(A),
3c9u
(A),
3. Ligand:
ACP × 2
Phosphomethylphosphonic acid adenylate ester
PDB codes:
3c9s
(A),
3c9t
(A).
4. Ligand:
ADP × 1
Adenosine-5'-Diphosphate
PDB code:
3c9u
(A).
5. Ligand:
TPP × 1
Thiamine diphosphate
PDB code:
3c9u
(A).
6. Ligand:
TPS × 1
Thiamin phosphate
PDB code:
3c9t
(A).
Cluster 2 contains 5 ligand types
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Ligand
Description
1. Ligand:
ATP × 1
adenosine triphosphate
Adenosine-5'-Triphosphate
PDB code:
3c9r
(A).
_Mg
2. Metal:
_MG × 4
PDB codes:
3c9r
(A),
3c9s
(A),
3c9t
(A),
3c9u
(A).
3. Ligand:
ACP × 2
Phosphomethylphosphonic acid adenylate ester
PDB codes:
3c9s
(A),
3c9t
(A).
4. Ligand:
ADP × 1
Adenosine-5'-Diphosphate
PDB code:
3c9u
(A).
5. Ligand:
TPP × 1
Thiamine diphosphate
PDB code:
3c9u
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
PO4 × 1
Phosphate ion
PDB code:
1vqv
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
PO4 × 1
Phosphate ion
PDB code:
1vqv
(A).