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Ligand clusters for UniProt code O67082

Ligand clusters for O67082: Ribonuclease 3 OS=Aquifex aeolicus (strain VF5) GN=rnc PE=1 SV=1

Top 6 (of 7) ligand clusters
Cluster 1.
4 ligand types
15 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1rc7A  
JSmol
 

Structures

PDB   Schematic diagram
1rc7A    
1rc5A    
1jfzA    
1yz9A    
2nufA    
 more ...

 

 Cluster 1 contains 4 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 12
PDB codes: 1rc5(A), 2ez6(A), 2nuf(A), 2nug(A), 4m2z(A), 4m30(A),

_Mn
 
2. Metal: _MN × 1
PDB code: 1jfz(A).


 
3. Ligand: __A × 1
PDB code: 4m30(A).


 
4. Ligand: __C × 1
PDB code: 4m2z(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: __A × 1
PDB code: 4m30(A).


 
2. Ligand: __C × 1
PDB code: 4m2z(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: TRS × 1
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code: 1rc7(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 4m30(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1yz9(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1yz9(A).

 

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