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Ligand clusters for UniProt code O50112
Ligand clusters for O50112: Putative uncharacterized protein PH1404 OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH1404 PE=1 SV=1
Top 6 (of 13) ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
2 ligand types
7 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 3af5A
Structures
PDB
Schematic diagram
3af5
A
3af6
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
3af5
(A).
2. Ligand:
SSU-SSU-SSU-SSU-SSU-SSU × 1
SSU
=Uridine-5'-Phosphorothioate.
PDB code:
3af6
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
SSU-SSU × 1
SSU
=Uridine-5'-Phosphorothioate.
PDB code:
3af6
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
ACY × 1
Acetic acid
PDB code:
3af5
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
3af6
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
ACY × 1
Acetic acid
PDB code:
3af5
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
3af6
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 4
PDB codes:
3af5
(A),
3af6
(A),
2. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
3af5
(A),
3af6
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
3af5
(A),
3af6
(A).