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Ligand clusters for UniProt code O50112

Ligand clusters for O50112: Putative uncharacterized protein PH1404 OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH1404 PE=1 SV=1

Top 6 (of 13) ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
2 ligand types
7 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 3af5A  
JSmol
 

Structures

PDB   Schematic diagram
3af5A    
3af6A    

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3af5(A).


 
2. Ligand: SSU-SSU-SSU-SSU-SSU-SSU × 1
SSU=Uridine-5'-Phosphorothioate.
PDB code: 3af6(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: SSU-SSU × 1
SSU=Uridine-5'-Phosphorothioate.
PDB code: 3af6(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: ACY × 1
Acetic acid
PDB code: 3af5(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 3af6(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: ACY × 1
Acetic acid
PDB code: 3af5(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 3af6(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 4
PDB codes: 3af5(A), 3af6(A),


 
2. Ligand: SO4 × 3
Sulfate ion
PDB codes: 3af5(A), 3af6(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 3af5(A), 3af6(A).

 

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