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Ligand clusters for UniProt code O00311

Ligand clusters for O00311: Cell division cycle 7-related protein kinase from Homo sapiens

5 ligand clusters
Cluster 1.
7 ligand types
13 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
1 ligand
Representative protein: 6ya7A  
JSmol
 

Structures

PDB   Schematic diagram
6ya7A    
4f9bA    
4f9aA    
6ya8A    
6ya6A    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 3
PDB codes: 4f99(A), 4f9a(A), 6ya8(A).


 
2. Ligand: ADP × 4
Adenosine-5'-Diphosphate
PDB codes: 4f99(A), 4f9a(A), 6ya7(A), 6ya8(A).


 
3. Ligand: 0SX × 2
8-Chloro-2-[(2s)-Pyrrolidin-2-Yl][1]benzofuro[3,2- D]pyrimidin-4(3h)-One
PDB codes: 4f9c(A), 6ya6(A).


 
4. Ligand: 0SY × 1
2-(Pyridin-4-Yl)-1,5,6,7-Tetrahydro-4h-Pyrrolo[3,2- C]pyridin-4-One
PDB code: 4f9b(A).


 
5. Ligand: BEF × 1
Beryllium trifluoride ion
PDB code: 6ya8(A).


 
6. Ligand: LEU-THR-7O5-SEP-PRO-GLY-ARG-ASP-LEU × 1
7O5=(2~{s})-2-Azanyl-3-(2-Sulfanylethanoylamino)propanoic acid, SEP=Phosphoserine.
PDB code: 6ya7(A).

_Zn
 
7. Metal: _ZN × 1
PDB code: 6ya7(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 6ya6(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: BO3 × 1
boric acid
Boric acid
PDB code: 6ya6(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 3
PDB codes: 6ya6(A), 6ya7(A), 6ya8(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 1
PDB code: 6ya7(A).

 

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